This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3dhw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:41, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3dhw.png|left|200px]]
 
-
<!--
+
==Crystal structure of methionine importer MetNI==
-
The line below this paragraph, containing "STRUCTURE_3dhw", creates the "Structure Box" on the page.
+
<StructureSection load='3dhw' size='340' side='right'caption='[[3dhw]], [[Resolution|resolution]] 3.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3dhw]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DHW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DHW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.7&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dhw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dhw OCA], [https://pdbe.org/3dhw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dhw RCSB], [https://www.ebi.ac.uk/pdbsum/3dhw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dhw ProSAT]</span></td></tr>
-
{{STRUCTURE_3dhw| PDB=3dhw | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/METI_ECOLI METI_ECOLI] Part of the binding-protein-dependent transport system for D-methionine and the toxic methionine analog alpha-methyl-methionine. Probably responsible for the translocation of the substrate across the membrane.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dh/3dhw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dhw ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of methionine importer MetNI===
+
==See Also==
-
 
+
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_18621668}}, adds the Publication Abstract to the page
+
[[Category: Escherichia coli K-12]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 18621668 is the PubMed ID number.
+
[[Category: Large Structures]]
-
-->
+
[[Category: Johnson E]]
-
{{ABSTRACT_PUBMED_18621668}}
+
[[Category: Kadaba NS]]
-
 
+
[[Category: Kaiser JT]]
-
==About this Structure==
+
[[Category: Lee AT]]
-
3DHW is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli_k12 Escherichia coli k12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DHW OCA].
+
[[Category: Rees DC]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:18621668</ref><references group="xtra"/>
+
-
[[Category: Escherichia coli k12]]
+
-
[[Category: Johnson, E.]]
+
-
[[Category: Kadaba, N S.]]
+
-
[[Category: Kaiser, J T.]]
+
-
[[Category: Lee, A T.]]
+
-
[[Category: Rees, D C.]]
+
-
[[Category: Abc-transporter]]
+
-
[[Category: Amino-acid transport]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Inner membrane]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Membrane protein/hydrolase complex]]
+
-
[[Category: Methionine uptake transporter]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Transmembrane]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 17:05:07 2009''
+

Current revision

Crystal structure of methionine importer MetNI

PDB ID 3dhw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3dhw"
Personal tools