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3dme

From Proteopedia

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{{Seed}}
 
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[[Image:3dme.jpg|left|200px]]
 
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<!--
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==Crystal structure of conserved exported protein from Bordetella pertussis. NorthEast Structural Genomics target BeR141==
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The line below this paragraph, containing "STRUCTURE_3dme", creates the "Structure Box" on the page.
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<StructureSection load='3dme' size='340' side='right'caption='[[3dme]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3dme]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_pertussis Bordetella pertussis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DME OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DME FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
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{{STRUCTURE_3dme| PDB=3dme | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dme OCA], [https://pdbe.org/3dme PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dme RCSB], [https://www.ebi.ac.uk/pdbsum/3dme PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dme ProSAT]</span></td></tr>
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</table>
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===Crystal structure of conserved exported protein from Bordetella pertussis. NorthEast Structural Genomics target BeR141===
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== Function ==
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[https://www.uniprot.org/uniprot/Q7VU70_BORPE Q7VU70_BORPE]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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3DME is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bordetella_pertussis Bordetella pertussis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DME OCA].
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dm/3dme_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dme ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Bordetella pertussis]]
[[Category: Bordetella pertussis]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Abashidze, M.]]
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[[Category: Abashidze M]]
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[[Category: Acton, T B.]]
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[[Category: Acton TB]]
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[[Category: Everett, J K.]]
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[[Category: Everett JK]]
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[[Category: Foote, E L.]]
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[[Category: Foote EL]]
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[[Category: Hunt, J F.]]
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[[Category: Hunt JF]]
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[[Category: Janjua, H.]]
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[[Category: Janjua H]]
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[[Category: Liu, J.]]
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[[Category: Liu J]]
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[[Category: Montelione, G T.]]
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[[Category: Montelione GT]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Rost B]]
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[[Category: Rost, B.]]
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[[Category: Seetharaman J]]
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[[Category: Seetharaman, J.]]
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[[Category: Tong L]]
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[[Category: Tong, L.]]
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[[Category: Wang D]]
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[[Category: Wang, D.]]
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[[Category: Xiao R]]
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[[Category: Xiao, R.]]
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[[Category: Conserved exported protein]]
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[[Category: Nesg]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 27 11:32:53 2008''
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Current revision

Crystal structure of conserved exported protein from Bordetella pertussis. NorthEast Structural Genomics target BeR141

PDB ID 3dme

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