This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ecc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:46, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3ecc.png|left|200px]]
 
-
<!--
+
==Crystal structure of the DnaC helicase loader in complex with ADP-BeF3==
-
The line below this paragraph, containing "STRUCTURE_3ecc", creates the "Structure Box" on the page.
+
<StructureSection load='3ecc' size='340' side='right'caption='[[3ecc]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ecc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ECC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ECC FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=BEF:BERYLLIUM+TRIFLUORIDE+ION'>BEF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_3ecc| PDB=3ecc | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ecc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ecc OCA], [https://pdbe.org/3ecc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ecc RCSB], [https://www.ebi.ac.uk/pdbsum/3ecc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ecc ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O67056_AQUAE O67056_AQUAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ec/3ecc_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ecc ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of the DnaC helicase loader in complex with ADP-BeF3===
+
==See Also==
-
 
+
*[[DnaC helicase loader|DnaC helicase loader]]
-
 
+
*[[Helicase 3D structures|Helicase 3D structures]]
-
==About this Structure==
+
__TOC__
-
3ECC is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ECC OCA].
+
</StructureSection>
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
-
[[Category: Berger, J.]]
+
[[Category: Large Structures]]
-
[[Category: Coons, M M.]]
+
[[Category: Berger J]]
-
[[Category: Erzberger, J P.]]
+
[[Category: Coons MM]]
-
[[Category: Mott, M L.]]
+
[[Category: Erzberger JP]]
-
[[Category: Atp-binding]]
+
[[Category: Mott ML]]
-
[[Category: Helicase loader]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Replication initiation factor]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 12 20:04:50 2009''
+

Current revision

Crystal structure of the DnaC helicase loader in complex with ADP-BeF3

PDB ID 3ecc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools