This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3g60

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:52, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3g60.jpg|left|200px]]
 
-
<!--
+
==Structure of P-glycoprotein Reveals a Molecular Basis for Poly-Specific Drug Binding==
-
The line below this paragraph, containing "STRUCTURE_3g60", creates the "Structure Box" on the page.
+
<StructureSection load='3g60' size='340' side='right'caption='[[3g60]], [[Resolution|resolution]] 4.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3g60]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. The March 2010 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''P-glycoprotein'' by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2010_3 10.2210/rcsb_pdb/mom_2010_3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G60 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G60 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 4.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0JZ:(4R,11R,18R)-4,11,18-TRI(PROPAN-2-YL)-6,13,20-TRISELENA-3,10,17,22,23,24-HEXAAZATETRACYCLO[17.2.1.1~5,8~.1~12,15~]TETRACOSA-1(21),5(24),7,12(23),14,19(22)-HEXAENE-2,9,16-TRIONE'>0JZ</scene></td></tr>
-
{{STRUCTURE_3g60| PDB=3g60 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g60 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g60 OCA], [https://pdbe.org/3g60 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g60 RCSB], [https://www.ebi.ac.uk/pdbsum/3g60 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g60 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Structure of P-glycoprotein Reveals a Molecular Basis for Poly-Specific Drug Binding===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/MDR1A_MOUSE MDR1A_MOUSE] Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells.<ref>PMID:19325113</ref>
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3G60 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G60 OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g6/3g60_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g60 ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Aller, S G.]]
 
-
[[Category: Chang, G.]]
 
-
[[Category: Chittaboina, S.]]
 
-
[[Category: Harrell, P M.]]
 
-
[[Category: Trinh, Y T.]]
 
-
[[Category: Urbatsch, I L.]]
 
-
[[Category: Ward, A.]]
 
-
[[Category: Weng, Y.]]
 
-
[[Category: Yu, J.]]
 
-
[[Category: Zhang, Q.]]
 
-
[[Category: Zhuo, R.]]
 
-
[[Category: Cyclic peptide]]
 
-
[[Category: Membrane protein]]
 
-
[[Category: Multidrug resistance]]
 
[[Category: P-glycoprotein]]
[[Category: P-glycoprotein]]
-
[[Category: Pgp]]
+
[[Category: RCSB PDB Molecule of the Month]]
-
 
+
[[Category: Aller SG]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 12:40:33 2009''
+
[[Category: Chang G]]
 +
[[Category: Chittaboina S]]
 +
[[Category: Harrell PM]]
 +
[[Category: Trinh YT]]
 +
[[Category: Urbatsch IL]]
 +
[[Category: Ward A]]
 +
[[Category: Weng Y]]
 +
[[Category: Yu J]]
 +
[[Category: Zhang Q]]
 +
[[Category: Zhuo R]]

Current revision

Structure of P-glycoprotein Reveals a Molecular Basis for Poly-Specific Drug Binding

PDB ID 3g60

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools