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3gfo
From Proteopedia
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==Structure of cbiO1 from clostridium perfringens: Part of the ABC transporter complex cbiONQ.== | ==Structure of cbiO1 from clostridium perfringens: Part of the ABC transporter complex cbiONQ.== | ||
| - | <StructureSection load='3gfo' size='340' side='right' caption='[[3gfo]], [[Resolution|resolution]] 2.30Å' scene=''> | + | <StructureSection load='3gfo' size='340' side='right'caption='[[3gfo]], [[Resolution|resolution]] 2.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3gfo]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3gfo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_perfringens_ATCC_13124 Clostridium perfringens ATCC 13124]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GFO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GFO FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gfo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gfo OCA], [https://pdbe.org/3gfo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gfo RCSB], [https://www.ebi.ac.uk/pdbsum/3gfo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gfo ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gfo TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/ECFA3_CLOP1 ECFA3_CLOP1] ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.[HAMAP-Rule:MF_01710] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/3gfo_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/3gfo_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gfo ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[ABC transporter|ABC transporter]] | + | *[[ABC transporter 3D structures|ABC transporter 3D structures]] |
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Clostridium perfringens | + | [[Category: Clostridium perfringens ATCC 13124]] |
| - | [[Category: Almo | + | [[Category: Large Structures]] |
| - | [[Category: Burley | + | [[Category: Almo SC]] |
| - | [[Category: Dickey | + | [[Category: Burley SK]] |
| - | [[Category: Do | + | [[Category: Dickey M]] |
| - | [[Category: Morano | + | [[Category: Do J]] |
| - | + | [[Category: Morano C]] | |
| - | [[Category: Ramagopal | + | [[Category: Ramagopal UA]] |
| - | [[Category: Toro | + | [[Category: Toro R]] |
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Current revision
Structure of cbiO1 from clostridium perfringens: Part of the ABC transporter complex cbiONQ.
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