This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ghy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:54, 21 February 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of a putative ketopantoate reductase from Ralstonia solanacearum MolK2==
==Crystal structure of a putative ketopantoate reductase from Ralstonia solanacearum MolK2==
-
<StructureSection load='3ghy' size='340' side='right' caption='[[3ghy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='3ghy' size='340' side='right'caption='[[3ghy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ghy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ralstonia_solanacearum Ralstonia solanacearum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GHY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GHY FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ghy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ralstonia_solanacearum_MolK2 Ralstonia solanacearum MolK2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GHY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GHY FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PRK06522, RSMK02416 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=305 Ralstonia solanacearum])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/2-dehydropantoate_2-reductase 2-dehydropantoate 2-reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.169 1.1.1.169] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ghy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ghy OCA], [https://pdbe.org/3ghy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ghy RCSB], [https://www.ebi.ac.uk/pdbsum/3ghy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ghy ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3ghy TOPSAN]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ghy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ghy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ghy RCSB], [http://www.ebi.ac.uk/pdbsum/3ghy PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3ghy TOPSAN]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/F6G5W7_RALS8 F6G5W7_RALS8]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gh/3ghy_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gh/3ghy_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ghy ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 2-dehydropantoate 2-reductase]]
+
[[Category: Large Structures]]
-
[[Category: Ralstonia solanacearum]]
+
[[Category: Ralstonia solanacearum MolK2]]
-
[[Category: Almo, S C]]
+
[[Category: Almo SC]]
-
[[Category: Burley, S K]]
+
[[Category: Burley SK]]
-
[[Category: Chang, S]]
+
[[Category: Chang S]]
-
[[Category: Freeman, J]]
+
[[Category: Freeman J]]
-
[[Category: Morano, C]]
+
[[Category: Morano C]]
-
[[Category: Structural genomic]]
+
[[Category: Patskovsky Y]]
-
[[Category: Patskovsky, Y]]
+
[[Category: Ramagopal UA]]
-
[[Category: Ramagopal, U A]]
+
[[Category: Sauder JM]]
-
[[Category: Sauder, J M]]
+
[[Category: Toro R]]
-
[[Category: Toro, R]]
+
-
[[Category: Nad-binding domain]]
+
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: PSI, Protein structure initiative]]
+

Current revision

Crystal structure of a putative ketopantoate reductase from Ralstonia solanacearum MolK2

PDB ID 3ghy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools