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3gme

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{{Seed}}
 
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[[Image:3gme.jpg|left|200px]]
 
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<!--
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==Crystal Structure of Polynucleotide Phosphorylase in complex with RNase E and manganese==
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The line below this paragraph, containing "STRUCTURE_3gme", creates the "Structure Box" on the page.
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<StructureSection load='3gme' size='340' side='right'caption='[[3gme]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3gme]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Escherichia_coli_O139:H28_str._E24377A Escherichia coli O139:H28 str. E24377A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GME OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GME FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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{{STRUCTURE_3gme| PDB=3gme | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gme OCA], [https://pdbe.org/3gme PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gme RCSB], [https://www.ebi.ac.uk/pdbsum/3gme PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gme ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PNP_ECO24 PNP_ECO24] Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3'- to 5'-direction (By similarity).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gme_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gme ConSurf].
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<div style="clear:both"></div>
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===Crystal Structure of Polynucleotide Phosphorylase in complex with RNase E and manganese===
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==See Also==
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*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_19327365}}, adds the Publication Abstract to the page
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[[Category: Escherichia coli]]
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(as it appears on PubMed at http://www.pubmed.gov), where 19327365 is the PubMed ID number.
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[[Category: Escherichia coli O139:H28 str. E24377A]]
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-->
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[[Category: Large Structures]]
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{{ABSTRACT_PUBMED_19327365}}
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[[Category: Luisi BL]]
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[[Category: Nurmohamed S]]
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==About this Structure==
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3GME is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli_e24377a Escherichia coli e24377a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GME OCA].
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==Reference==
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<ref group="xtra">PMID:19327365</ref><references group="xtra"/>
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[[Category: Escherichia coli e24377a]]
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[[Category: Polyribonucleotide nucleotidyltransferase]]
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[[Category: Luisi, B L.]]
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[[Category: Nurmohamed, S.]]
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[[Category: Cytoplasm]]
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[[Category: Hydrolase]]
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[[Category: Nucleotidyltransferase]]
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[[Category: Protein-rna complex]]
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[[Category: Rna-binding]]
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[[Category: Transferase]]
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[[Category: Transferase / protein binding complex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 10 18:05:38 2009''
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Current revision

Crystal Structure of Polynucleotide Phosphorylase in complex with RNase E and manganese

PDB ID 3gme

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