3go2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:55, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3go2.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium==
-
The line below this paragraph, containing "STRUCTURE_3go2", creates the "Structure Box" on the page.
+
<StructureSection load='3go2' size='340' side='right'caption='[[3go2]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3go2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Paraburkholderia_xenovorans_LB400 Paraburkholderia xenovorans LB400]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GO2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GO2 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_3go2| PDB=3go2 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3go2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3go2 OCA], [https://pdbe.org/3go2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3go2 RCSB], [https://www.ebi.ac.uk/pdbsum/3go2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3go2 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3go2 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q13PB7_PARXL Q13PB7_PARXL]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3GO2 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Burkholderia_xenovorans_lb400 Burkholderia xenovorans lb400]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GO2 OCA].
+
Check<jmol>
-
[[Category: Burkholderia xenovorans lb400]]
+
<jmolCheckbox>
-
[[Category: Almo, S C.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/go/3go2_consurf.spt"</scriptWhenChecked>
-
[[Category: Bain, K T.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Bonanno, J B.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Burley, S K.]]
+
</jmolCheckbox>
-
[[Category: Chang, S.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3go2 ConSurf].
-
[[Category: Dickey, M.]]
+
<div style="clear:both"></div>
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
__TOC__
-
[[Category: Ozyurt, S.]]
+
</StructureSection>
-
[[Category: Sauder, J M.]]
+
[[Category: Large Structures]]
-
[[Category: Wasserman, S.]]
+
[[Category: Paraburkholderia xenovorans LB400]]
-
[[Category: Isomerase]]
+
[[Category: Almo SC]]
-
[[Category: New york sgx research center for structural genomic]]
+
[[Category: Bain KT]]
-
[[Category: Nysgxrc]]
+
[[Category: Bonanno JB]]
-
[[Category: Protein structure initiative]]
+
[[Category: Burley SK]]
-
[[Category: Psi-2]]
+
[[Category: Chang S]]
-
[[Category: Structural genomic]]
+
[[Category: Dickey M]]
-
 
+
[[Category: Ozyurt S]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 2 16:15:23 2009''
+
[[Category: Sauder JM]]
 +
[[Category: Wasserman S]]

Current revision

Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium

PDB ID 3go2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools