This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3gw7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:57, 21 February 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of a metal-dependent phosphohydrolase with conserved HD domain (yedJ) from Escherichia coli in complex with nickel ions. Northeast Structural Genomics Consortium Target ER63==
==Crystal structure of a metal-dependent phosphohydrolase with conserved HD domain (yedJ) from Escherichia coli in complex with nickel ions. Northeast Structural Genomics Consortium Target ER63==
-
<StructureSection load='3gw7' size='340' side='right' caption='[[3gw7]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
+
<StructureSection load='3gw7' size='340' side='right'caption='[[3gw7]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3gw7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GW7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GW7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3gw7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GW7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GW7 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b1962, JW1945, yedJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gw7 OCA], [http://pdbe.org/3gw7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gw7 RCSB], [http://www.ebi.ac.uk/pdbsum/3gw7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gw7 ProSAT], [http://www.topsan.org/Proteins/NESGC/3gw7 TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gw7 OCA], [https://pdbe.org/3gw7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gw7 RCSB], [https://www.ebi.ac.uk/pdbsum/3gw7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gw7 ProSAT], [https://www.topsan.org/Proteins/NESGC/3gw7 TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YEDJ_ECOLI YEDJ_ECOLI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 20: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ecoli]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Abashidze, M]]
+
[[Category: Large Structures]]
-
[[Category: Acton, T B]]
+
[[Category: Abashidze M]]
-
[[Category: Cunningham, K]]
+
[[Category: Acton TB]]
-
[[Category: Everett, J K]]
+
[[Category: Cunningham K]]
-
[[Category: Forouhar, F]]
+
[[Category: Everett JK]]
-
[[Category: Hunt, J F]]
+
[[Category: Forouhar F]]
-
[[Category: Janjua, J]]
+
[[Category: Hunt JF]]
-
[[Category: Ma, L]]
+
[[Category: Janjua J]]
-
[[Category: Montelione, G T]]
+
[[Category: Ma L]]
-
[[Category: Structural genomic]]
+
[[Category: Montelione GT]]
-
[[Category: Nair, R]]
+
[[Category: Nair R]]
-
[[Category: Rost, B]]
+
[[Category: Rost B]]
-
[[Category: Seetharaman, J]]
+
[[Category: Seetharaman J]]
-
[[Category: Tong, L]]
+
[[Category: Tong L]]
-
[[Category: Xiao, R]]
+
[[Category: Xiao R]]
-
[[Category: Zhao, L]]
+
[[Category: Zhao L]]
-
[[Category: All alpha-helical protein]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Nesg]]
+
-
[[Category: PSI, Protein structure initiative]]
+

Current revision

Crystal structure of a metal-dependent phosphohydrolase with conserved HD domain (yedJ) from Escherichia coli in complex with nickel ions. Northeast Structural Genomics Consortium Target ER63

PDB ID 3gw7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3gw7"
Personal tools