This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3h4n

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:58, 21 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3h4n.jpg|left|200px]]
 
-
<!--
+
==PpcD, A cytochrome c7 from Geobacter sulfurreducens==
-
The line below this paragraph, containing "STRUCTURE_3h4n", creates the "Structure Box" on the page.
+
<StructureSection load='3h4n' size='340' side='right'caption='[[3h4n]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3h4n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacter_sulfurreducens Geobacter sulfurreducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H4N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H4N FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
{{STRUCTURE_3h4n| PDB=3h4n | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h4n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h4n OCA], [https://pdbe.org/3h4n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h4n RCSB], [https://www.ebi.ac.uk/pdbsum/3h4n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h4n ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q74ED8_GEOSL Q74ED8_GEOSL]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h4/3h4n_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h4n ConSurf].
 +
<div style="clear:both"></div>
-
===PpcD, A cytochrome c7 from Geobacter sulfurreducens===
+
==See Also==
-
 
+
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19857457}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 19857457 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_19857457}}
+
-
 
+
-
==About this Structure==
+
-
3H4N is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Geobacter_sulfurreducens Geobacter sulfurreducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H4N OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:19857457</ref><references group="xtra"/>
+
[[Category: Geobacter sulfurreducens]]
[[Category: Geobacter sulfurreducens]]
-
[[Category: Pokkuluri, P R.]]
+
[[Category: Large Structures]]
-
[[Category: Schiffer, M.]]
+
[[Category: Pokkuluri PR]]
-
[[Category: Cytochrome c7]]
+
[[Category: Schiffer M]]
-
[[Category: Electron transport]]
+
-
[[Category: Geobacter sulfurreducen]]
+
-
[[Category: Multiheme cytochrome]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 30 13:58:23 2009''
+

Current revision

PpcD, A cytochrome c7 from Geobacter sulfurreducens

PDB ID 3h4n

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3h4n"
Personal tools