This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3h5i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 3h5i is ON HOLD Authors: Bonanno, J.B., Gilmore, M., Bain, K.T., Iizuka, M., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New ...)
Current revision (09:58, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3h5i is ON HOLD
+
==Crystal structure of the N-terminal domain of a response regulator/sensory box/GGDEF 3-domain protein from Carboxydothermus hydrogenoformans==
-
 
+
<StructureSection load='3h5i' size='340' side='right'caption='[[3h5i]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
Authors: Bonanno, J.B., Gilmore, M., Bain, K.T., Iizuka, M., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3h5i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Carboxydothermus_hydrogenoformans_Z-2901 Carboxydothermus hydrogenoformans Z-2901]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H5I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H5I FirstGlance]. <br>
-
Description: Crystal structure of the N-terminal domain of a response regulator/sensory box/GGDEF 3-domain protein from Carboxydothermus hydrogenoformans
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 30 08:48:07 2009''
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h5i OCA], [https://pdbe.org/3h5i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h5i RCSB], [https://www.ebi.ac.uk/pdbsum/3h5i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h5i ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3h5i TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q3ADQ4_CARHZ Q3ADQ4_CARHZ]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/3h5i_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h5i ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Carboxydothermus hydrogenoformans Z-2901]]
 +
[[Category: Large Structures]]
 +
[[Category: Almo SC]]
 +
[[Category: Bain KT]]
 +
[[Category: Bonanno JB]]
 +
[[Category: Burley SK]]
 +
[[Category: Gilmore M]]
 +
[[Category: Iizuka M]]
 +
[[Category: Romero R]]
 +
[[Category: Sauder JM]]
 +
[[Category: Wasserman S]]

Current revision

Crystal structure of the N-terminal domain of a response regulator/sensory box/GGDEF 3-domain protein from Carboxydothermus hydrogenoformans

PDB ID 3h5i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools