This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3hyj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:02, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3hyj.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of the N-terminal LAGLIDADG domain of DUF199/WhiA==
-
The line below this paragraph, containing "STRUCTURE_3hyj", creates the "Structure Box" on the page.
+
<StructureSection load='3hyj' size='340' side='right'caption='[[3hyj]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3hyj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HYJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HYJ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
{{STRUCTURE_3hyj| PDB=3hyj | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hyj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hyj OCA], [https://pdbe.org/3hyj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hyj RCSB], [https://www.ebi.ac.uk/pdbsum/3hyj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hyj ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of the N-terminal LAGLIDADG domain of DUF199/WhiA===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/WHIA_THEMA WHIA_THEMA] Involved in cell division and chromosome segregation.[HAMAP-Rule:MF_01420]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3HYJ is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HYJ OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hy/3hyj_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hyj ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
-
[[Category: Clifton, M C.]]
+
[[Category: Clifton MC]]
-
[[Category: Kaiser, B K.]]
+
[[Category: Kaiser BK]]
-
[[Category: Shen, B W.]]
+
[[Category: Shen BW]]
-
[[Category: Stoddard, B L.]]
+
[[Category: Stoddard BL]]
-
[[Category: Helix-turn-helix]]
+
-
[[Category: Homing endonuclease]]
+
-
[[Category: Hth]]
+
-
[[Category: Laglidadg]]
+
-
[[Category: Transcription regulator]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Sep 3 16:12:56 2009''
+

Current revision

Crystal structure of the N-terminal LAGLIDADG domain of DUF199/WhiA

PDB ID 3hyj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools