This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3i5l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:03, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3i5l.png|left|200px]]
 
-
<!--
+
==Allosteric Modulation of DNA by Small Molecules==
-
The line below this paragraph, containing "STRUCTURE_3i5l", creates the "Structure Box" on the page.
+
<StructureSection load='3i5l' size='340' side='right'caption='[[3i5l]], [[Resolution|resolution]] 1.18&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3i5l]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I5L FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.18&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1P1:(22R,51R)-22,51-DIAMINO-5,11,17,28,34,40,46,57-OCTAMETHYL-2,5,8,11,14,17,20,25,28,31,34,37,40,43,46,49,54,57,60,61,64,65-DOCOSAAZANONACYCLO[54.2.1.1~4,7~.1~10,13~.1~16,19~.1~27,30~.1~33,36~.1~39,42~.1~45,48~]HEXAHEXACONTA-1(58),4(66),6,10(65),12,16(64),18,27(63),29,33(62),35,39(61),41,45(60),47,56(59)-HEXADECAENE-3,9,15,21,26,32,38,44,50,55-DECONE'>1P1</scene>, <scene name='pdbligand=C38:5-IODO-2-DEOXY-CYTIDINE-5-MONOPHOSPHATE'>C38</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
{{STRUCTURE_3i5l| PDB=3i5l | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i5l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5l OCA], [https://pdbe.org/3i5l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i5l RCSB], [https://www.ebi.ac.uk/pdbsum/3i5l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i5l ProSAT]</span></td></tr>
-
 
+
</table>
-
===Allosteric Modulation of DNA by Small Molecules===
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
<!--
+
[[Category: Chenoweth DM]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_19666554}}, adds the Publication Abstract to the page
+
[[Category: Dervan PB]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 19666554 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_19666554}}
+
-
 
+
-
==About this Structure==
+
-
3I5L is a 2 chains structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5L OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:19666554</ref><references group="xtra"/>
+
-
[[Category: Chenoweth, D M.]]
+
-
[[Category: Dervan, P B.]]
+
-
[[Category: Cyclic polyamide]]
+
-
[[Category: Dna binder]]
+
-
[[Category: Minor groove binder]]
+
-
[[Category: Pyim polyamide]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 16 08:28:36 2009''
+

Current revision

Allosteric Modulation of DNA by Small Molecules

PDB ID 3i5l

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools