This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3k44

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:15, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3k44.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Drosophila melanogaster Pur-alpha==
-
The line below this paragraph, containing "STRUCTURE_3k44", creates the "Structure Box" on the page.
+
<StructureSection load='3k44' size='340' side='right'caption='[[3k44]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3k44]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K44 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K44 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-
{{STRUCTURE_3k44| PDB=3k44 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k44 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k44 OCA], [https://pdbe.org/3k44 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k44 RCSB], [https://www.ebi.ac.uk/pdbsum/3k44 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k44 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of Drosophila melanogaster Pur-alpha===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q95RR6_DROME Q95RR6_DROME]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_19846792}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19846792 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k4/3k44_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_19846792}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
3K44 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K44 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k44 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:19846792</ref><references group="xtra"/>
+
</StructureSection>
[[Category: Drosophila melanogaster]]
[[Category: Drosophila melanogaster]]
-
[[Category: Graebsch, A.]]
+
[[Category: Large Structures]]
-
[[Category: Niessing, D.]]
+
[[Category: Graebsch A]]
-
[[Category: Roche, S.]]
+
[[Category: Niessing D]]
-
[[Category: Dna binding protein]]
+
[[Category: Roche S]]
-
[[Category: Nucleic acid binding protein]]
+
-
[[Category: Pur domain]]
+
-
[[Category: Pur repeat]]
+
-
[[Category: Pur-alpha]]
+
-
[[Category: Rna binding protein]]
+
-
[[Category: Whirly fold]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 18 17:24:39 2009''
+

Current revision

Crystal Structure of Drosophila melanogaster Pur-alpha

PDB ID 3k44

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3k44"
Personal tools