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3kk5

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{{Seed}}
 
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[[Image:3kk5.png|left|200px]]
 
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<!--
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==Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction of the virophage Sputnik==
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The line below this paragraph, containing "STRUCTURE_3kk5", creates the "Structure Box" on the page.
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<SX load='3kk5' size='340' side='right' viewer='molstar' caption='[[3kk5]], [[Resolution|resolution]] 10.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3kk5]] is a 13 chain structure with sequence from [https://en.wikipedia.org/wiki/Acanthamoeba_polyphaga Acanthamoeba polyphaga]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KK5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KK5 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 10.6&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kk5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kk5 OCA], [https://pdbe.org/3kk5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kk5 RCSB], [https://www.ebi.ac.uk/pdbsum/3kk5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kk5 ProSAT]</span></td></tr>
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{{STRUCTURE_3kk5| PDB=3kk5 | SCENE= }}
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</table>
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== Function ==
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===Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction of the virophage Sputnik===
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[https://www.uniprot.org/uniprot/MCP_PBCV1 MCP_PBCV1]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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<!--
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_19889775}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 19889775 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kk/3kk5_consurf.spt"</scriptWhenChecked>
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-->
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_19889775}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kk5 ConSurf].
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3KK5 is a 13 chains structure of sequences from [http://en.wikipedia.org/wiki/Acanthamoeba_polyphaga Acanthamoeba polyphaga]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KK5 OCA].
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<div style="clear:both"></div>
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__TOC__
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==Reference==
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</SX>
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<ref group="xtra">PMID:19889775</ref><references group="xtra"/>
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[[Category: Acanthamoeba polyphaga]]
[[Category: Acanthamoeba polyphaga]]
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[[Category: Rossmann, M G.]]
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[[Category: Large Structures]]
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[[Category: Sun, S]]
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[[Category: Rossmann MG]]
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[[Category: Capsid protein]]
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[[Category: Sun S]]
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[[Category: Double jellyroll]]
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[[Category: Icosahedral virus]]
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[[Category: Late protein]]
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[[Category: Virion]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 6 08:55:43 2010''
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Current revision

Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction of the virophage Sputnik

3kk5, resolution 10.60Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

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