This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3kln

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:17, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3kln is ON HOLD until Paper Publication
+
==Vibrio cholerae VpsT==
-
 
+
<StructureSection load='3kln' size='340' side='right'caption='[[3kln]], [[Resolution|resolution]] 3.08&Aring;' scene=''>
-
Authors: Krasteva, P.V., Navarro, V.A.S., Sondermann, H.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3kln]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor Vibrio cholerae O1 biovar El Tor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KLN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KLN FirstGlance]. <br>
-
Description: Effector (apo-form)
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.078&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kln OCA], [https://pdbe.org/3kln PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kln RCSB], [https://www.ebi.ac.uk/pdbsum/3kln PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kln ProSAT]</span></td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 25 09:13:16 2009''
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9KKZ8_VIBCH Q9KKZ8_VIBCH]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kl/3kln_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kln ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Vibrio cholerae O1 biovar El Tor]]
 +
[[Category: Krasteva PV]]
 +
[[Category: Navarro VAS]]
 +
[[Category: Sondermann H]]

Current revision

Vibrio cholerae VpsT

PDB ID 3kln

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools