3lsv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:22, 21 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3lsv.jpg|left|200px]]
 
-
<!--
+
==Structure of the A237F mutant of the pentameric ligand gated ion channel from Gloeobacter Violaceus==
-
The line below this paragraph, containing "STRUCTURE_3lsv", creates the "Structure Box" on the page.
+
<StructureSection load='3lsv' size='340' side='right'caption='[[3lsv]], [[Resolution|resolution]] 3.15&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3lsv]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LSV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LSV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.15&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lsv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lsv OCA], [https://pdbe.org/3lsv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lsv RCSB], [https://www.ebi.ac.uk/pdbsum/3lsv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lsv ProSAT]</span></td></tr>
-
{{STRUCTURE_3lsv| PDB=3lsv | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GLIC_GLOVI GLIC_GLOVI] Cationic channel with similar permeabilities for Na(+) and K(+), that is activated by an increase of the proton concentration on the extracellular side. Displays no permeability for chloride ions. Shows slow kinetics of activation, no desensitization and a single channel conductance of 8 pS. Might contribute to adaptation to external pH change.<ref>PMID:17167423</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ls/3lsv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lsv ConSurf].
 +
<div style="clear:both"></div>
-
===Structure of the A237F mutant of the pentameric ligand gated ion channel from Gloeobacter Violaceus===
+
==See Also==
-
 
+
*[[Ion channels 3D structures|Ion channels 3D structures]]
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20308576}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 20308576 is the PubMed ID number.
+
</StructureSection>
-
-->
+
-
{{ABSTRACT_PUBMED_20308576}}
+
-
 
+
-
==About this Structure==
+
-
3LSV is a 5 chains structure with sequences from [http://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LSV OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:20308576</ref><references group="xtra"/>
+
[[Category: Gloeobacter violaceus]]
[[Category: Gloeobacter violaceus]]
-
[[Category: Corringer, P J.]]
+
[[Category: Large Structures]]
-
[[Category: Delarue, M.]]
+
[[Category: Corringer PJ]]
-
[[Category: Nury, H.]]
+
[[Category: Delarue M]]
-
[[Category: Channel]]
+
[[Category: Nury H]]
-
[[Category: Cys-loop]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Plgic]]
+
-
[[Category: Transport protein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 28 10:51:05 2010''
+

Current revision

Structure of the A237F mutant of the pentameric ligand gated ion channel from Gloeobacter Violaceus

PDB ID 3lsv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools