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3ndi

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[[Image:3ndi.png|left|200px]]
 
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==X-ray Structure of a C-3'-Methyltransferase in Complex with S-adenosylmethionine and dTMP==
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The line below this paragraph, containing "STRUCTURE_3ndi", creates the "Structure Box" on the page.
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<StructureSection load='3ndi' size='340' side='right'caption='[[3ndi]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3ndi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Micromonospora_chalcea Micromonospora chalcea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NDI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NDI FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=TMP:THYMIDINE-5-PHOSPHATE'>TMP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_3ndi| PDB=3ndi | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ndi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ndi OCA], [https://pdbe.org/3ndi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ndi RCSB], [https://www.ebi.ac.uk/pdbsum/3ndi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ndi ProSAT]</span></td></tr>
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</table>
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===X-ray Structure of a C-3'-Methyltransferase in Complex with S-adenosylmethionine and dTMP===
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== Function ==
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[https://www.uniprot.org/uniprot/B5L6K6_MICCH B5L6K6_MICCH]
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 20527922 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nd/3ndi_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_20527922}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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[[3ndi]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Micromonospora_chalcea Micromonospora chalcea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NDI OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ndi ConSurf].
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<div style="clear:both"></div>
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==See Also==
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__TOC__
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*[[Journal:JBIC:10]]
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</StructureSection>
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*[[Journal:JBIC:9]]
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[[Category: Large Structures]]
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*[[Journal:PLoS ONE:1]]
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*[[User:Lynmarie K Thompson/workbench]]
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==Reference==
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<ref group="xtra">PMID:020527922</ref><references group="xtra"/>
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[[Category: Micromonospora chalcea]]
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[[Category: Avey, M K.]]
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[[Category: Bruender, N A.]]
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[[Category: Holden, H M.]]
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[[Category: Kaur, M.]]
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[[Category: Thoden, J B.]]
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[[Category: C-3'-methyltransferase]]
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[[Category: Kijanose]]
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[[Category: Micromonospora chalcea]]
[[Category: Micromonospora chalcea]]
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[[Category: S-adenosylmethionine]]
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[[Category: Avey MK]]
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[[Category: Sugar methylation]]
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[[Category: Bruender NA]]
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[[Category: Tcab9]]
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[[Category: Holden HM]]
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[[Category: Tetradeoxysugar]]
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[[Category: Kaur M]]
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[[Category: Tetronitrose]]
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[[Category: Thoden JB]]
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[[Category: Transferase]]
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Current revision

X-ray Structure of a C-3'-Methyltransferase in Complex with S-adenosylmethionine and dTMP

PDB ID 3ndi

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