This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3nuq
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3nuq| PDB=3nuq | SCENE= }} | ||
| - | ===Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiae=== | ||
| - | == | + | ==Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiae== |
| - | [[3nuq]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3nuq' size='340' side='right'caption='[[3nuq]], [[Resolution|resolution]] 1.70Å' scene=''> |
| - | [ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[3nuq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NUQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NUQ FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nuq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nuq OCA], [https://pdbe.org/3nuq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nuq RCSB], [https://www.ebi.ac.uk/pdbsum/3nuq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nuq ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | [ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/SDT1_YEAST SDT1_YEAST] Could be an enzyme that inactivates 6-azauracil by modifying it. |
| - | [ | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | [[ | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nu/3nuq_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nuq ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Saccharomyces cerevisiae S288C]] |
| - | [[Category: | + | [[Category: Brown G]] |
| - | [[Category: | + | [[Category: Dong A]] |
| + | [[Category: Edwards AM]] | ||
| + | [[Category: Evdokimova E]] | ||
| + | [[Category: Joachimiak A]] | ||
| + | [[Category: Kudritsdka M]] | ||
| + | [[Category: Savchenko A]] | ||
| + | [[Category: Singer AU]] | ||
| + | [[Category: Yakunin AF]] | ||
| + | [[Category: Yang C]] | ||
Current revision
Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiae
| |||||||||||
