This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3p4s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:38, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3p4s.png|left|200px]]
 
-
<!--
+
==Crystal structure of Menaquinol:fumarate oxidoreductase in complex with a 3-nitropropionate adduct==
-
The line below this paragraph, containing "STRUCTURE_3p4s", creates the "Structure Box" on the page.
+
<StructureSection load='3p4s' size='340' side='right'caption='[[3p4s]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3p4s]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_042 Escherichia coli 042] and [https://en.wikipedia.org/wiki/Escherichia_coli_O55:H7_str._CB9615 Escherichia coli O55:H7 str. CB9615]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P4S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3P4S FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3NP:3-NITROPROPANOIC+ACID'>3NP</scene>, <scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
-
{{STRUCTURE_3p4s| PDB=3p4s | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3p4s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p4s OCA], [https://pdbe.org/3p4s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3p4s RCSB], [https://www.ebi.ac.uk/pdbsum/3p4s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3p4s ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of Menaquinol:fumarate oxidoreductase in complex with a 3-nitropropionate adduct===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/FRDA_ECOLI FRDA_ECOLI] Two distinct, membrane-bound, FAD-containing enzymes are responsible for the catalysis of fumarate and succinate interconversion; the fumarate reductase is used in anaerobic growth, and the succinate dehydrogenase is used in aerobic growth.
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_21098488}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 21098488 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_21098488}}
+
-
 
+
-
==About this Structure==
+
-
[[3p4s]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_042 Escherichia coli 042] and [http://en.wikipedia.org/wiki/Escherichia_coli_o55:h7_str._cb9615 Escherichia coli o55:h7 str. cb9615]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P4S OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:21098488</ref><references group="xtra"/>
+
[[Category: Escherichia coli 042]]
[[Category: Escherichia coli 042]]
-
[[Category: Escherichia coli o55:h7 str. cb9615]]
+
[[Category: Escherichia coli O55:H7 str. CB9615]]
-
[[Category: Andrell, J.]]
+
[[Category: Large Structures]]
-
[[Category: Archuleta, T L.]]
+
[[Category: Andrell J]]
-
[[Category: Cecchini, G.]]
+
[[Category: Archuleta TL]]
-
[[Category: Davis, T A.]]
+
[[Category: Cecchini G]]
-
[[Category: Ham, A J.]]
+
[[Category: Davis TA]]
-
[[Category: Iverson, T M.]]
+
[[Category: Ham AJ]]
-
[[Category: Johnston, J N.]]
+
[[Category: Iverson TM]]
-
[[Category: Luna-Chavez, C.]]
+
[[Category: Johnston JN]]
-
[[Category: Maklashina, E.]]
+
[[Category: Luna-Chavez C]]
-
[[Category: McDonald, W H.]]
+
[[Category: Maklashina E]]
-
[[Category: Sarwar, M.]]
+
[[Category: McDonald WH]]
-
[[Category: Stern, H A.]]
+
[[Category: Sarwar M]]
-
[[Category: Tomasiak, T M.]]
+
[[Category: Stern HA]]
-
[[Category: Yankowskaya, V.]]
+
[[Category: Tomasiak TM]]
 +
[[Category: Yankowskaya V]]

Current revision

Crystal structure of Menaquinol:fumarate oxidoreductase in complex with a 3-nitropropionate adduct

PDB ID 3p4s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3p4s"
Personal tools