This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3qqq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:49, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3qqq.png|left|200px]]
 
-
<!--
+
==Crystal structure of non-symbiotic plant hemoglobin from Trema tomentosa==
-
The line below this paragraph, containing "STRUCTURE_3qqq", creates the "Structure Box" on the page.
+
<StructureSection load='3qqq' size='340' side='right'caption='[[3qqq]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3qqq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trema_tomentosum Trema tomentosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QQQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QQQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3qqq| PDB=3qqq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qqq OCA], [https://pdbe.org/3qqq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qqq RCSB], [https://www.ebi.ac.uk/pdbsum/3qqq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qqq ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of non-symbiotic plant hemoglobin from Trema tomentosa===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/HBL_TRETO HBL_TRETO] May not function as an oxygen storage or transport protein, but might act as an oxygen sensor or play a role in electron transfer, possibly to a bound oxygen molecule.
-
 
+
-
<!--
+
-
The line below this paragraph, {{ABSTRACT_PUBMED_21491905}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 21491905 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_21491905}}
+
-
 
+
-
==About this Structure==
+
-
[[3qqq]] is a 2 chain structure of [[Hemoglobin]] with sequence from [http://en.wikipedia.org/wiki/Trema_tomentosa Trema tomentosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QQQ OCA].
+
==See Also==
==See Also==
-
*[[Hemoglobin]]
+
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:021491905</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Trema tomentosa]]
+
[[Category: Trema tomentosum]]
-
[[Category: Dispirito, A.]]
+
[[Category: Dispirito A]]
-
[[Category: Hargrove, M S.]]
+
[[Category: Hargrove MS]]
-
[[Category: Kakar, S.]]
+
[[Category: Kakar S]]
-
[[Category: Nix, J C.]]
+
[[Category: Nix JC]]
-
[[Category: Savage, A.]]
+
[[Category: Savage A]]
-
[[Category: Sturms, R.]]
+
[[Category: Sturms R]]
-
[[Category: Globin fold]]
+
-
[[Category: Heme binding]]
+
-
[[Category: Hexacoordination]]
+
-
[[Category: Metal binding protein]]
+
-
[[Category: Oxygen binding]]
+

Current revision

Crystal structure of non-symbiotic plant hemoglobin from Trema tomentosa

PDB ID 3qqq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools