This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5qy9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:29, 21 February 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5qy9 is ON HOLD
+
==PanDDA analysis group deposition -- Aar2/RNaseH in complex with fragment F2X-Entry C11b==
 +
<StructureSection load='5qy9' size='340' side='right'caption='[[5qy9]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5qy9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5QY9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5QY9 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene>, <scene name='pdbligand=R8Y:N-ethyl-N-(thiophene-2-carbonyl)-beta-alanine'>R8Y</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5qy9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5qy9 OCA], [https://pdbe.org/5qy9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5qy9 RCSB], [https://www.ebi.ac.uk/pdbsum/5qy9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5qy9 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PRP8_YEAST PRP8_YEAST] Required for pre-spliceosome formation, which is the first step of pre-mRNA splicing. This protein is associated with snRNP U5. Has a role in branch site-3' splice site selection. Associates with the branch site-3' splice 3'-exon region. Also has a role in cell cycle.<ref>PMID:2835658</ref> <ref>PMID:9150140</ref> <ref>PMID:12773561</ref> <ref>PMID:18779563</ref>
-
Authors: Weiss, M.S., Wollenhaupt, J., Metz, A., Barthel, T., Lima, G.M.A., Heine, A., Mueller, U., Klebe, G.
+
==See Also==
-
 
+
*[[Pre-mRNA splicing factors 3D structures|Pre-mRNA splicing factors 3D structures]]
-
Description: PanDDA analysis group deposition --Aar2/RNaseH in complex with fragment F2X-Entry C11b
+
== References ==
-
[[Category: Unreleased Structures]]
+
<references/>
-
[[Category: Metz, A]]
+
__TOC__
-
[[Category: Lima, G.M.A]]
+
</StructureSection>
-
[[Category: Mueller, U]]
+
[[Category: Large Structures]]
-
[[Category: Heine, A]]
+
[[Category: Saccharomyces cerevisiae S288C]]
-
[[Category: Wollenhaupt, J]]
+
[[Category: Barthel T]]
-
[[Category: Klebe, G]]
+
[[Category: Heine A]]
-
[[Category: Weiss, M.S]]
+
[[Category: Klebe G]]
-
[[Category: Barthel, T]]
+
[[Category: Lima GMA]]
 +
[[Category: Metz A]]
 +
[[Category: Mueller U]]
 +
[[Category: Weiss MS]]
 +
[[Category: Wollenhaupt J]]

Current revision

PanDDA analysis group deposition -- Aar2/RNaseH in complex with fragment F2X-Entry C11b

PDB ID 5qy9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools