This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3taf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:07, 1 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3taf.png|left|200px]]
 
-
<!--
+
==5-fluorocytosine paired with ddGMP in RB69 gp43==
-
The line below this paragraph, containing "STRUCTURE_3taf", creates the "Structure Box" on the page.
+
<StructureSection load='3taf' size='340' side='right'caption='[[3taf]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3taf]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_RB69 Escherichia phage RB69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TAF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TAF FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C37:5-FLUORO-2-DEOXY-CYTIDINE-5-MONOPHOSPHATE'>C37</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3taf| PDB=3taf | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3taf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3taf OCA], [https://pdbe.org/3taf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3taf RCSB], [https://www.ebi.ac.uk/pdbsum/3taf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3taf ProSAT]</span></td></tr>
-
 
+
</table>
-
===5-fluorocytosine paired with ddGMP in RB69 gp43===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/DPOL_BPR69 DPOL_BPR69] This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.
-
 
+
-
<!--
+
-
The line below this paragraph, {{ABSTRACT_PUBMED_22026756}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 22026756 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_22026756}}
+
-
 
+
-
==About this Structure==
+
-
[[3taf]] is a 12 chain structure of [[DNA polymerase]] with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_rb69 Enterobacteria phage rb69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TAF OCA].
+
==See Also==
==See Also==
-
*[[DNA polymerase]]
+
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:022026756</ref><references group="xtra"/>
+
[[Category: Escherichia phage RB69]]
-
[[Category: DNA-directed DNA polymerase]]
+
[[Category: Large Structures]]
-
[[Category: Enterobacteria phage rb69]]
+
[[Category: Zahn KE]]
-
[[Category: Zahn, K E.]]
+
-
[[Category: Transferase-dna complex]]
+

Current revision

5-fluorocytosine paired with ddGMP in RB69 gp43

PDB ID 3taf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3taf"
Personal tools