This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3u4a

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:17, 1 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis==
==From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis==
-
<StructureSection load='3u4a' size='340' side='right' caption='[[3u4a]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='3u4a' size='340' side='right'caption='[[3u4a]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3u4a]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Compost_metagenome Compost metagenome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3U4A FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3u4a]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Compost_metagenome Compost metagenome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3U4A FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CBI:CELLOBIOSE'>CBI</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.196&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3u48|3u48]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PRD_900005:beta-cellobiose'>PRD_900005</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3u4a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u4a OCA], [http://pdbe.org/3u4a PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3u4a RCSB], [http://www.ebi.ac.uk/pdbsum/3u4a PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3u4a ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3u4a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u4a OCA], [https://pdbe.org/3u4a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3u4a RCSB], [https://www.ebi.ac.uk/pdbsum/3u4a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3u4a ProSAT]</span></td></tr>
</table>
</table>
==See Also==
==See Also==
-
*[[Beta-glucosidase|Beta-glucosidase]]
+
*[[Beta-glucosidase 3D structures|Beta-glucosidase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Compost metagenome]]
[[Category: Compost metagenome]]
-
[[Category: Adams, P D]]
+
[[Category: Large Structures]]
-
[[Category: Friedland, G D]]
+
[[Category: Adams PD]]
-
[[Category: McAndrew, R P]]
+
[[Category: D'haeseleer P]]
-
[[Category: Northen, T]]
+
[[Category: Friedland GD]]
-
[[Category: Park, J I]]
+
[[Category: McAndrew RP]]
-
[[Category: Reindl, W]]
+
[[Category: Northen T]]
-
[[Category: Sale, K L]]
+
[[Category: Park JI]]
-
[[Category: Simmons, B A]]
+
[[Category: Reindl W]]
-
[[Category: Haeseleer, P D]]
+
[[Category: Sale KL]]
-
[[Category: 3-beta-glucosidase]]
+
[[Category: Simmons BA]]
-
[[Category: Hydrolase]]
+
-
[[Category: Tim barrel]]
+

Current revision

From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis

PDB ID 3u4a

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools