This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


403d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:35, 1 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:403d.png|left|200px]]
 
-
<!--
+
==5'-D(*CP*GP*CP*(HYD)AP*AP*AP*TP*TP*TP*GP*CP*G)-3', 2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE==
-
The line below this paragraph, containing "STRUCTURE_403d", creates the "Structure Box" on the page.
+
<StructureSection load='403d' size='340' side='right'caption='[[403d]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[403d]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=403D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=403D FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HT1:2-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5-BI-BENZIMIDAZOLE'>HT1</scene>, <scene name='pdbligand=IGU:2-DEOXYISOGUANINE-5-MONOPHOSPHATE'>IGU</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_403d| PDB=403d | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=403d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=403d OCA], [https://pdbe.org/403d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=403d RCSB], [https://www.ebi.ac.uk/pdbsum/403d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=403d ProSAT]</span></td></tr>
-
 
+
</table>
-
===5'-D(*CP*GP*CP*(HYD)AP*AP*AP*TP*TP*TP*GP*CP*G)-3', 2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE===
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
<!--
+
[[Category: Bauer C]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_9692982}}, adds the Publication Abstract to the page
+
[[Category: Gao Y-G]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 9692982 is the PubMed ID number.
+
[[Category: Roberts C]]
-
-->
+
[[Category: Robinson H]]
-
{{ABSTRACT_PUBMED_9692982}}
+
[[Category: Switzer C]]
-
 
+
[[Category: Wang AH-J]]
-
==About this Structure==
+
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=403D OCA].
+
-
 
+
-
==Reference==
+
-
2'-Deoxyisoguanosine adopts more than one tautomer to form base pairs with thymidine observed by high-resolution crystal structure analysis., Robinson H, Gao YG, Bauer C, Roberts C, Switzer C, Wang AH, Biochemistry. 1998 Aug 4;37(31):10897-905. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9692982 9692982]
+
-
[[Category: Bauer, C.]]
+
-
[[Category: Gao, Y G.]]
+
-
[[Category: Roberts, C.]]
+
-
[[Category: Robinson, H.]]
+
-
[[Category: Switzer, C.]]
+
-
[[Category: Wang, A H.J.]]
+
-
[[Category: B-dna double helix]]
+
-
[[Category: Dna/drug complex]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul 3 13:14:43 2008''
+

Current revision

5'-D(*CP*GP*CP*(HYD)AP*AP*AP*TP*TP*TP*GP*CP*G)-3', 2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE

PDB ID 403d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/403d"
Personal tools