This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4f9d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:13, 1 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 4f9d is ON HOLD until Paper Publication
+
==Structure of Escherichia coli PgaB 42-655 in complex with nickel==
-
 
+
<StructureSection load='4f9d' size='340' side='right'caption='[[4f9d]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
Authors: Little, D.J., Poloczek, J., Whitney, J.C., Robinson, H., Nitz, M., Howell, P.L.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4f9d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4F9D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4F9D FirstGlance]. <br>
-
Description: Structure of Escherichia coli PgaB 42-655 in complex with nickel
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4f9d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4f9d OCA], [https://pdbe.org/4f9d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4f9d RCSB], [https://www.ebi.ac.uk/pdbsum/4f9d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4f9d ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PGAB_ECOLI PGAB_ECOLI] Catalyzes the N-deacetylation of poly-beta-1,6-N-acetyl-D-glucosamine (PGA), a biofilm adhesin polysaccharide. N-deacetylation promotes PGA export through the PgaA porin.<ref>PMID:15090514</ref> <ref>PMID:18359807</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Escherichia coli K-12]]
 +
[[Category: Large Structures]]
 +
[[Category: Howell PL]]
 +
[[Category: Little DJ]]
 +
[[Category: Nitz M]]
 +
[[Category: Poloczek J]]
 +
[[Category: Robinson H]]
 +
[[Category: Whitney JC]]

Current revision

Structure of Escherichia coli PgaB 42-655 in complex with nickel

PDB ID 4f9d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools