This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4hos

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:42, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4hos.jpg|left|200px]]
 
-
{{STRUCTURE_4hos| PDB=4hos | SCENE= }}
+
==Crystal Structure of Full-Length Human IFIT5 with 5`-triphosphate Oligouridine==
-
 
+
<StructureSection load='4hos' size='340' side='right'caption='[[4hos]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Crystal Structure of Full-Length Human IFIT5 with 5`-triphosphate Oligouridine===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4hos]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HOS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HOS FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UTP:URIDINE+5-TRIPHOSPHATE'>UTP</scene></td></tr>
-
[[4hos]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HOS OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hos FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hos OCA], [https://pdbe.org/4hos PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hos RCSB], [https://www.ebi.ac.uk/pdbsum/4hos PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hos ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/IFIT5_HUMAN IFIT5_HUMAN] Interferon-induced RNA-binding protein that specifically binds single-stranded RNA bearing a 5'-triphosphate group (PPP-RNA), thereby acting as a sensor of viral single-stranded RNAs. Single-stranded PPP-RNAs, which lack 2'-O-methylation of the 5' cap and bear a 5'-triphosphate group instead, are specific from viruses, providing a molecular signature to distinguish between self and non-self mRNAs by the host during viral infection. Directly binds PPP-RNA in a non-sequence-specific manner. Also recognizes and binds tRNAs.<ref>PMID:23317505</ref> <ref>PMID:23334420</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Abbas, Y M.]]
+
[[Category: Large Structures]]
-
[[Category: Gorna, M W.]]
+
[[Category: Abbas YM]]
-
[[Category: Nagar, B.]]
+
[[Category: Gorna MW]]
-
[[Category: Pichlmair, A.]]
+
[[Category: Nagar B]]
-
[[Category: Superti-Furga, G.]]
+
[[Category: Pichlmair A]]
-
[[Category: Antiviral]]
+
[[Category: Superti-Furga G]]
-
[[Category: Rna]]
+
-
[[Category: Rna binding]]
+
-
[[Category: Rna binding protein-rna complex]]
+
-
[[Category: Tpr]]
+

Current revision

Crystal Structure of Full-Length Human IFIT5 with 5`-triphosphate Oligouridine

PDB ID 4hos

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools