This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4j7o

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:01, 1 March 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of the N-terminal Repeat Domain of Rickettsia Sca2==
==Structure of the N-terminal Repeat Domain of Rickettsia Sca2==
-
<StructureSection load='4j7o' size='340' side='right' caption='[[4j7o]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
+
<StructureSection load='4j7o' size='340' side='right'caption='[[4j7o]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4j7o]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rickettsia_conorii Rickettsia conorii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J7O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4J7O FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4j7o]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rickettsia_conorii Rickettsia conorii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J7O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4J7O FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.175&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sca2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=781 Rickettsia conorii])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4j7o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j7o OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4j7o RCSB], [http://www.ebi.ac.uk/pdbsum/4j7o PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4j7o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j7o OCA], [https://pdbe.org/4j7o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4j7o RCSB], [https://www.ebi.ac.uk/pdbsum/4j7o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4j7o ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
+
== Function ==
-
== Publication Abstract from PubMed ==
+
[https://www.uniprot.org/uniprot/SCA2_RICCN SCA2_RICCN]
-
Sca2 (surface cell antigen 2) is the only bacterial protein known to promote both actin filament nucleation and profilin-dependent elongation, mimicking eukaryotic formins to assemble actin comet tails for Rickettsia motility. We show that Sca2's functional mimicry of formins is achieved through a unique mechanism. Unlike formins, Sca2 is monomeric, but has N- and C-terminal repeat domains (NRD and CRD) that interact with each other for processive barbed-end elongation. The crystal structure of NRD reveals a previously undescribed fold, consisting of helix-loop-helix repeats arranged into an overall crescent shape. CRD is predicted to share this fold and might form together with NRD, a doughnut-shaped formin-like structure. In between NRD and CRD, proline-rich sequences mediate the incorporation of profilin-actin for elongation, and WASP-homology 2 (WH2) domains recruit actin monomers for nucleation. Sca2's alpha-helical fold is unusual among Gram-negative autotransporters, which overwhelmingly fold as beta-solenoids. Rickettsia has therefore "rediscovered" formin-like actin nucleation and elongation.
+
-
 
+
-
Rickettsia Sca2 has evolved formin-like activity through a different molecular mechanism.,Madasu Y, Suarez C, Kast DJ, Kovar DR, Dominguez R Proc Natl Acad Sci U S A. 2013 Jul 16;110(29):E2677-86. doi:, 10.1073/pnas.1307235110. Epub 2013 Jul 1. PMID:23818602<ref>PMID:23818602</ref>
+
-
 
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Rickettsia conorii]]
[[Category: Rickettsia conorii]]
-
[[Category: Dominguez, R]]
+
[[Category: Dominguez R]]
-
[[Category: Madasu, Y]]
+
[[Category: Madasu Y]]
-
[[Category: Actin]]
+
-
[[Category: Actin nucleation]]
+
-
[[Category: Cell invasion]]
+
-
[[Category: Helical repeat]]
+

Current revision

Structure of the N-terminal Repeat Domain of Rickettsia Sca2

PDB ID 4j7o

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools