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4kvl
From Proteopedia
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| - | {{STRUCTURE_4kvl| PDB=4kvl | SCENE= }} | ||
| - | ===Crystal structure of Oryza sativa fatty acid alpha-dioxygenase Y379F with palmitic acid=== | ||
| - | {{ABSTRACT_PUBMED_23934749}} | ||
| - | == | + | ==Crystal structure of Oryza sativa fatty acid alpha-dioxygenase Y379F with palmitic acid== |
| - | [[4kvl]] is a 1 chain structure with sequence from [ | + | <StructureSection load='4kvl' size='340' side='right'caption='[[4kvl]], [[Resolution|resolution]] 1.96Å' scene=''> |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[4kvl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryza_sativa Oryza sativa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KVL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KVL FirstGlance]. <br> |
| - | < | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kvl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kvl OCA], [https://pdbe.org/4kvl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kvl RCSB], [https://www.ebi.ac.uk/pdbsum/4kvl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kvl ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PIOX_ORYSJ PIOX_ORYSJ] Alpha-dioxygenase that catalyzes the primary oxygenation step of a variety of 14-20 carbon fatty acids, containing up to three unsaturated bonds, into their corresponding 2R-hydroperoxides (PubMed:11909851, PubMed:18596034). Involved in the production of oxylipins that function in cell signaling, wound healing, and protection from infection (PubMed:11909851, PubMed:18596034).<ref>PMID:11909851</ref> <ref>PMID:18596034</ref> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Oryza sativa]] | [[Category: Oryza sativa]] | ||
| - | [[Category: Koszelak-Rosenblum | + | [[Category: Koszelak-Rosenblum M]] |
| - | [[Category: Malkowski | + | [[Category: Malkowski MG]] |
| - | [[Category: Zhu | + | [[Category: Zhu G]] |
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Current revision
Crystal structure of Oryza sativa fatty acid alpha-dioxygenase Y379F with palmitic acid
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