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4ny1

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<StructureSection load='4ny1' size='340' side='right'caption='[[4ny1]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='4ny1' size='340' side='right'caption='[[4ny1]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4ny1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Yerps Yerps]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NY1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NY1 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4ny1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis_IP_32953 Yersinia pseudotuberculosis IP 32953]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NY1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NY1 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4i2v|4i2v]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">udp, YPTB0250 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273123 YERPS])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ny1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ny1 OCA], [https://pdbe.org/4ny1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ny1 RCSB], [https://www.ebi.ac.uk/pdbsum/4ny1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ny1 ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uridine_phosphorylase Uridine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.3 2.4.2.3] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ny1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ny1 OCA], [http://pdbe.org/4ny1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ny1 RCSB], [http://www.ebi.ac.uk/pdbsum/4ny1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ny1 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/I3NID1_YERPS I3NID1_YERPS]] Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.[RuleBase:RU361131]
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[https://www.uniprot.org/uniprot/I3NID1_YERPS I3NID1_YERPS] Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.[RuleBase:RU361131]
==See Also==
==See Also==
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*[[Uridine phosphorylase|Uridine phosphorylase]]
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*[[Uridine phosphorylase 3D structures|Uridine phosphorylase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Uridine phosphorylase]]
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[[Category: Yersinia pseudotuberculosis IP 32953]]
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[[Category: Yerps]]
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[[Category: Balaev VV]]
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[[Category: Balaev, V V]]
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[[Category: Gabdoulkhakov AG]]
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[[Category: Gabdoulkhakov, A G]]
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[[Category: Lashkov AA]]
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[[Category: Lashkov, A A]]
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[[Category: Mikhailov AM]]
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[[Category: Mikhailov, A M]]
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[[Category: Phosphate ion]]
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[[Category: Pyrimidine base]]
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[[Category: Rossmann fold]]
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[[Category: Transferase]]
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Current revision

X-ray structure of the unliganded uridine phosphorylase from Yersinia pseudotuberculosis at 1.7 A resolution

PDB ID 4ny1

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