This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4q85

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:44, 1 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
==YcaO Bound with Non-hydrolyzable ATP (AMPCPP)==
+
 
-
<StructureSection load='4q85' size='340' side='right' caption='[[4q85]], [[Resolution|resolution]] 3.29&Aring;' scene=''>
+
==YcaO with Non-hydrolyzable ATP (AMPCPP) Bound==
 +
<StructureSection load='4q85' size='340' side='right'caption='[[4q85]], [[Resolution|resolution]] 3.29&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4q85]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q85 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Q85 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4q85]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q85 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q85 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=APC:DIPHOSPHOMETHYLPHOSPHONIC+ACID+ADENOSYL+ESTER'>APC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.29&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4q84|4q84]], [[4q86|4q86]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=APC:DIPHOSPHOMETHYLPHOSPHONIC+ACID+ADENOSYL+ESTER'>APC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4q85 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q85 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4q85 RCSB], [http://www.ebi.ac.uk/pdbsum/4q85 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q85 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q85 OCA], [https://pdbe.org/4q85 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q85 RCSB], [https://www.ebi.ac.uk/pdbsum/4q85 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q85 ProSAT]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YCAO_ECOLI YCAO_ECOLI] Involved in beta-methylthiolation of ribosomal protein S12.
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Chekan, J R.]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Nair, S K.]]
+
[[Category: Large Structures]]
-
[[Category: Protein binding]]
+
[[Category: Chekan JR]]
-
[[Category: Ycao atp binding domain]]
+
[[Category: Nair SK]]

Current revision

YcaO with Non-hydrolyzable ATP (AMPCPP) Bound

PDB ID 4q85

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools