This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4r39

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:50, 1 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Histidine kinase domain from Erythrobacter litoralis EL346 blue-light activated histidine kinase==
==Histidine kinase domain from Erythrobacter litoralis EL346 blue-light activated histidine kinase==
-
<StructureSection load='4r39' size='340' side='right' caption='[[4r39]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='4r39' size='340' side='right'caption='[[4r39]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4r39]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R39 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R39 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4r39]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Erythrobacter_litoralis_HTCC2594 Erythrobacter litoralis HTCC2594]. The March 2015 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Phototropin'' by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2015_3 10.2210/rcsb_pdb/mom_2015_3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R39 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R39 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.603&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4r38|4r38]], [[4r3a|4r3a]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Histidine_kinase Histidine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.13.3 2.7.13.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r39 OCA], [https://pdbe.org/4r39 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r39 RCSB], [https://www.ebi.ac.uk/pdbsum/4r39 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r39 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r39 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4r39 RCSB], [http://www.ebi.ac.uk/pdbsum/4r39 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LVHK2_ERYLH LVHK2_ERYLH] Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light.<ref>PMID:17717187</ref>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Histidine kinase]]
+
[[Category: Erythrobacter litoralis HTCC2594]]
-
[[Category: Gardner, K H]]
+
[[Category: Large Structures]]
-
[[Category: Rivera-Cancel, G]]
+
[[Category: Phototropin]]
-
[[Category: Tomchick, D R]]
+
[[Category: RCSB PDB Molecule of the Month]]
-
[[Category: Bergerat fold]]
+
[[Category: Gardner KH]]
-
[[Category: Histidine kinase domain]]
+
[[Category: Rivera-Cancel G]]
-
[[Category: Light-activated]]
+
[[Category: Tomchick DR]]
-
[[Category: Photoreceptor]]
+
-
[[Category: Sensory transduction]]
+
-
[[Category: Signal transduction]]
+
-
[[Category: Transferase]]
+

Current revision

Histidine kinase domain from Erythrobacter litoralis EL346 blue-light activated histidine kinase

PDB ID 4r39

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools