This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4rnh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:53, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==PaMorA tandem diguanylate cyclase - phosphodiesterase, c-di-GMP complex==
==PaMorA tandem diguanylate cyclase - phosphodiesterase, c-di-GMP complex==
-
<StructureSection load='4rnh' size='340' side='right' caption='[[4rnh]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
+
<StructureSection load='4rnh' size='340' side='right'caption='[[4rnh]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4rnh]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RNH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RNH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4rnh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RNH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RNH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D 3,2-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-1,9-DIHYDRO-6H-PURIN-6-ONE)'>C2E</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4rnf|4rnf]], [[4rni|4rni]], [[4rnj|4rnj]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rnh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rnh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rnh RCSB], [http://www.ebi.ac.uk/pdbsum/4rnh PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rnh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rnh OCA], [https://pdbe.org/4rnh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rnh RCSB], [https://www.ebi.ac.uk/pdbsum/4rnh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rnh ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9HVI8_PSEAE Q9HVI8_PSEAE]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Phippen, C W]]
+
[[Category: Large Structures]]
-
[[Category: Tews, I]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: C-di-gmp]]
+
[[Category: Phippen CW]]
-
[[Category: Diguanylate cyclase]]
+
[[Category: Tews I]]
-
[[Category: Gtp]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Phosphodiesterase]]
+
-
[[Category: Tandem ggdef and eal domain]]
+
-
[[Category: Transferase]]
+

Current revision

PaMorA tandem diguanylate cyclase - phosphodiesterase, c-di-GMP complex

PDB ID 4rnh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools