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3pvc

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{{STRUCTURE_3pvc| PDB=3pvc | SCENE= }}
 
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===Crystal structure of apo MnmC from Yersinia Pestis===
 
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{{ABSTRACT_PUBMED_23617613}}
 
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==Function==
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==Crystal structure of apo MnmC from Yersinia Pestis==
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[[http://www.uniprot.org/uniprot/MNMC_YERPE MNMC_YERPE]] Catalyzes the last two steps in the biosynthesis of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 (By similarity).
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<StructureSection load='3pvc' size='340' side='right'caption='[[3pvc]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
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== Structural highlights ==
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==About this Structure==
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<table><tr><td colspan='2'>[[3pvc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PVC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PVC FirstGlance]. <br>
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[[3pvc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pestis"_(lehmann_and_neumann_1896)_migula_1900 "bacillus pestis" (lehmann and neumann 1896) migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PVC OCA].
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.31&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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==Reference==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pvc OCA], [https://pdbe.org/3pvc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pvc RCSB], [https://www.ebi.ac.uk/pdbsum/3pvc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pvc ProSAT]</span></td></tr>
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<ref group="xtra">PMID:023617613</ref><references group="xtra"/><references/>
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</table>
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[[Category: Almo, S C.]]
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== Function ==
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[[Category: Kim, J.]]
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[https://www.uniprot.org/uniprot/MNMC_YERPE MNMC_YERPE] Catalyzes the last two steps in the biosynthesis of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 (By similarity).
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[[Category: NYSGRC, New York Structural Genomics Research Consortium.]]
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__TOC__
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[[Category: Fad]]
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</StructureSection>
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[[Category: Methylation]]
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[[Category: Large Structures]]
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[[Category: New york structural genomics research consortium]]
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[[Category: Yersinia pestis]]
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[[Category: Nysgrc]]
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[[Category: Almo SC]]
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[[Category: Oxidation]]
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[[Category: Kim J]]
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[[Category: Oxidoreductase]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-biology]]
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[[Category: Rossmann fold]]
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[[Category: Sam]]
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[[Category: Structural genomic]]
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[[Category: Transferase]]
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Current revision

Crystal structure of apo MnmC from Yersinia Pestis

PDB ID 3pvc

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