This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3pz3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:35, 1 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3pz3.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of RabGGTase(DELTA LRR; DELTA IG) in Complex with BMS-analogue 14==
-
The line below this paragraph, containing "STRUCTURE_3pz3", creates the "Structure Box" on the page.
+
<StructureSection load='3pz3' size='340' side='right'caption='[[3pz3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3pz3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PZ3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PZ3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PZ3:4-({(3R)-7-(5-FORMYLFURAN-2-YL)-4-[(4-METHOXYPHENYL)SULFONYL]-1-[(1-METHYL-1H-IMIDAZOL-5-YL)METHYL]-2,3,4,5-TETRAHYDRO-1H-1,4-BENZODIAZEPIN-3-YL}METHYL)PHENYL+BENZYLCARBAMATE'>PZ3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_3pz3| PDB=3pz3 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pz3 OCA], [https://pdbe.org/3pz3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pz3 RCSB], [https://www.ebi.ac.uk/pdbsum/3pz3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pz3 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PGTA_RAT PGTA_RAT] Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to both cysteines in Rab proteins with an -XXCC, -XCXC and -CCXX C-terminal, such as RAB1A, RAB3A and RAB5A respectively.
-
===Crystal structure of RabGGTase(DELTA LRR; DELTA IG) in Complex with BMS-analogue 14===
+
==See Also==
-
 
+
*[[Geranylgeranyl transferase 3D structures|Geranylgeranyl transferase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[3pz3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PZ3 OCA].
+
[[Category: Large Structures]]
-
 
+
[[Category: Rattus norvegicus]]
-
==Reference==
+
[[Category: Alexandrov K]]
-
<ref group="xtra">PMID:021520375</ref><references group="xtra"/>
+
[[Category: Blankenfeldt W]]
-
[[Category: Mus musculus]]
+
[[Category: Bon RS]]
-
[[Category: Protein geranylgeranyltransferase type II]]
+
[[Category: Goody RS]]
-
[[Category: Alexandrov, K.]]
+
[[Category: Guo Z]]
-
[[Category: Blankenfeldt, W.]]
+
[[Category: Stigter EA]]
-
[[Category: Bon, R S.]]
+
[[Category: Waldmann H]]
-
[[Category: Goody, R S.]]
+
-
[[Category: Guo, Z.]]
+
-
[[Category: Stigter, E A.]]
+
-
[[Category: Waldmann, H.]]
+

Current revision

Crystal structure of RabGGTase(DELTA LRR; DELTA IG) in Complex with BMS-analogue 14

PDB ID 3pz3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools