This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5di2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 5di2 is ON HOLD until Paper Publication Authors: Mir, A., Chen, J., Neau, D., Golden, B.L. Description: Two divalent metal ions and conformational ...)
Current revision (12:24, 6 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5di2 is ON HOLD until Paper Publication
+
==Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mn2+ at high pH==
 +
<StructureSection load='5di2' size='340' side='right'caption='[[5di2]], [[Resolution|resolution]] 2.99&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5di2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DI2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DI2 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.989&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5di2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5di2 OCA], [https://pdbe.org/5di2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5di2 RCSB], [https://www.ebi.ac.uk/pdbsum/5di2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5di2 ProSAT]</span></td></tr>
 +
</table>
-
Authors: Mir, A., Chen, J., Neau, D., Golden, B.L.
+
==See Also==
-
 
+
*[[Ribozyme 3D structures|Ribozyme 3D structures]]
-
Description: Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mn2+ at high pH
+
__TOC__
-
[[Category: Unreleased Structures]]
+
</StructureSection>
-
[[Category: Neau, D]]
+
[[Category: Large Structures]]
-
[[Category: Mir, A]]
+
[[Category: Synthetic construct]]
-
[[Category: Golden, B.L]]
+
[[Category: Chen J]]
-
[[Category: Chen, J]]
+
[[Category: Golden BL]]
 +
[[Category: Mir A]]
 +
[[Category: Neau D]]

Current revision

Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mn2+ at high pH

PDB ID 5di2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools