This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5uf6
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5uf6 is ON HOLD until sometime in the future Authors: Description: Category: Unreleased Structures) |
|||
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | The | + | ==The 2.8 A Electron Microscopy Structure of Adeno-Associated Virus-DJ Bound by a Heparanoid Pentasaccharide== |
| + | <SX load='5uf6' size='340' side='right' viewer='molstar' caption='[[5uf6]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5uf6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Adeno-associated_virus Adeno-associated virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UF6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UF6 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.8Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC+ACID'>IDS</scene>, <scene name='pdbligand=PRD_900028:fondaparinux'>PRD_900028</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene>, <scene name='pdbligand=SUS:2-DEOXY-3,6-DI-O-SULFO-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANOSE'>SUS</scene>, <scene name='pdbligand=ZDO:methyl+2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside'>ZDO</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5uf6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uf6 OCA], [https://pdbe.org/5uf6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5uf6 RCSB], [https://www.ebi.ac.uk/pdbsum/5uf6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5uf6 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| - | + | ==See Also== | |
| - | + | *[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | |
| - | + | __TOC__ | |
| - | [[Category: | + | </SX> |
| + | [[Category: Adeno-associated virus]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Chapman M]] | ||
| + | [[Category: Davulcu O]] | ||
| + | [[Category: Linhardt RJ]] | ||
| + | [[Category: Meyer NL]] | ||
| + | [[Category: Noble AJ]] | ||
| + | [[Category: Sousa DR]] | ||
| + | [[Category: Spear JM]] | ||
| + | [[Category: Stagg SM]] | ||
| + | [[Category: Xie Q]] | ||
| + | [[Category: Zhang F]] | ||
Current revision
The 2.8 A Electron Microscopy Structure of Adeno-Associated Virus-DJ Bound by a Heparanoid Pentasaccharide
| |||||||||
Categories: Adeno-associated virus | Large Structures | Chapman M | Davulcu O | Linhardt RJ | Meyer NL | Noble AJ | Sousa DR | Spear JM | Stagg SM | Xie Q | Zhang F
