This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6vdx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:37, 6 March 2024) (edit) (undo)
 
Line 1: Line 1:
==Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III)- Porphyrin and Substrate Trichlorophenol==
==Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III)- Porphyrin and Substrate Trichlorophenol==
-
<StructureSection load='6vdx' size='340' side='right'caption='[[6vdx]]' scene=''>
+
<StructureSection load='6vdx' size='340' side='right'caption='[[6vdx]], [[Resolution|resolution]] 1.53&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VDX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6VDX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6vdx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Amphitrite_ornata Amphitrite ornata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VDX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VDX FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6vdx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vdx OCA], [http://pdbe.org/6vdx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6vdx RCSB], [http://www.ebi.ac.uk/pdbsum/6vdx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6vdx ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.53&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MNR:PROTOPORPHYRIN+IX+CONTAINING+MN'>MNR</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=T6C:2,4,6-TRICHLOROPHENOL'>T6C</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vdx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vdx OCA], [https://pdbe.org/6vdx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vdx RCSB], [https://www.ebi.ac.uk/pdbsum/6vdx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vdx ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9NAV7_9ANNE Q9NAV7_9ANNE]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Amphitrite ornata]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Ghiladi RA]]
[[Category: Ghiladi RA]]

Current revision

Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III)- Porphyrin and Substrate Trichlorophenol

PDB ID 6vdx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools