This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5sbv
From Proteopedia
(Difference between revisions)
m (Protected "5sbv" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
==CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z31721798== | ==CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z31721798== | ||
| - | <StructureSection load='5sbv' size='340' side='right'caption='[[5sbv]]' scene=''> | + | <StructureSection load='5sbv' size='340' side='right'caption='[[5sbv]], [[Resolution|resolution]] 1.11Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5SBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5SBV FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5sbv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5SBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5SBV FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5sbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5sbv OCA], [https://pdbe.org/5sbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5sbv RCSB], [https://www.ebi.ac.uk/pdbsum/5sbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5sbv ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.109Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NW4:3-cyclohexyl-1-(morpholin-4-yl)propan-1-one'>NW4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5sbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5sbv OCA], [https://pdbe.org/5sbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5sbv RCSB], [https://www.ebi.ac.uk/pdbsum/5sbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5sbv ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/CD44_MOUSE CD44_MOUSE] Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing. | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| + | [[Category: Mus musculus]] | ||
[[Category: Bezerra GA]] | [[Category: Bezerra GA]] | ||
[[Category: Bountra C]] | [[Category: Bountra C]] | ||
Current revision
CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z31721798
| |||||||||||
