This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5svb
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Mechanism of ATP-Dependent Acetone Carboxylation, Acetone Carboxylase AMP bound structure== | ==Mechanism of ATP-Dependent Acetone Carboxylation, Acetone Carboxylase AMP bound structure== | ||
| - | <StructureSection load='5svb' size='340' side='right' caption='[[5svb]], [[Resolution|resolution]] 2.65Å' scene=''> | + | <StructureSection load='5svb' size='340' side='right'caption='[[5svb]], [[Resolution|resolution]] 2.65Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5svb]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5SVB OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[5svb]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthobacter_autotrophicus_Py2 Xanthobacter autotrophicus Py2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5SVB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5SVB FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand= | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.645Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5svb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5svb OCA], [https://pdbe.org/5svb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5svb RCSB], [https://www.ebi.ac.uk/pdbsum/5svb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5svb ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/ACXB_XANP2 ACXB_XANP2] Catalyzes the carboxylation of acetone to form acetoacetate. Has a reduced activity on butanone, and no activity on 2-pentatone, 3-pentatone, 2-hexanone, chloroacetone, pyruvate, phosphoenolpyruvate, acetaldehyde, propionaldehyde and propylene oxide.<ref>PMID:9237998</ref> |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Alleman | + | [[Category: Xanthobacter autotrophicus Py2]] |
| - | [[Category: Dubois | + | [[Category: Alleman AB]] |
| - | [[Category: Eilers | + | [[Category: Dubois JL]] |
| - | [[Category: Kabasakal | + | [[Category: Eilers BJ]] |
| - | [[Category: Murray | + | [[Category: Kabasakal BV]] |
| - | [[Category: Mus | + | [[Category: Murray JW]] |
| - | [[Category: Nocek | + | [[Category: Mus F]] |
| - | [[Category: Peters | + | [[Category: Nocek BP]] |
| - | + | [[Category: Peters JW]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Mechanism of ATP-Dependent Acetone Carboxylation, Acetone Carboxylase AMP bound structure
| |||||||||||
