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1f0s
From Proteopedia
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| - | {{Seed}} | ||
| - | [[Image:1f0s.png|left|200px]] | ||
| - | < | + | ==Crystal Structure of Human Coagulation Factor XA Complexed with RPR208707== |
| - | + | <StructureSection load='1f0s' size='340' side='right'caption='[[1f0s]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1f0s]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F0S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F0S FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PR2:THIENO[3,2-B]PYRIDINE-2-SULFONIC+ACID+[2-OXO-1-(1H-PYRROLO[2,3-C]PYRIDIN-2-YLMETHYL)-PYRROLIDIN-3-YL]-AMIDE'>PR2</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f0s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f0s OCA], [https://pdbe.org/1f0s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f0s RCSB], [https://www.ebi.ac.uk/pdbsum/1f0s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f0s ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Disease == | ||
| + | [https://www.uniprot.org/uniprot/FA10_HUMAN FA10_HUMAN] Defects in F10 are the cause of factor X deficiency (FA10D) [MIM:[https://omim.org/entry/227600 227600]. A hemorrhagic disease with variable presentation. Affected individuals can manifest prolonged nasal and mucosal hemorrhage, menorrhagia, hematuria, and occasionally hemarthrosis. Some patients do not have clinical bleeding diathesis.<ref>PMID:2790181</ref> <ref>PMID:1973167</ref> <ref>PMID:1985698</ref> <ref>PMID:7669671</ref> <ref>PMID:8529633</ref> <ref>PMID:7860069</ref> <ref>PMID:8845463</ref> <ref>PMID:8910490</ref> <ref>PMID:10468877</ref> <ref>PMID:10746568</ref> <ref>PMID:10739379</ref> <ref>PMID:11248282</ref> <ref>PMID:11728527</ref> <ref>PMID:12945883</ref> <ref>PMID:15650540</ref> <ref>PMID:17393015</ref> <ref>PMID:19135706</ref> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/FA10_HUMAN FA10_HUMAN] Factor Xa is a vitamin K-dependent glycoprotein that converts prothrombin to thrombin in the presence of factor Va, calcium and phospholipid during blood clotting. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f0/1f0s_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f0s ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | + | *[[Factor Xa|Factor Xa]] | |
| - | + | == References == | |
| - | + | <references/> | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
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| - | == | + | |
| - | < | + | |
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[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: Becker | + | [[Category: Large Structures]] |
| - | [[Category: Choi-Sledeski | + | [[Category: Becker MR]] |
| - | [[Category: Ewing | + | [[Category: Choi-Sledeski YM]] |
| - | [[Category: Guilloteau | + | [[Category: Ewing WR]] |
| - | [[Category: Klein | + | [[Category: Guilloteau JP]] |
| - | [[Category: Maignan | + | [[Category: Klein SI]] |
| - | [[Category: Mikol | + | [[Category: Maignan S]] |
| - | [[Category: Pauls | + | [[Category: Mikol V]] |
| - | [[Category: Pouzieux | + | [[Category: Pauls HW]] |
| - | [[Category: Spada | + | [[Category: Pouzieux S]] |
| - | + | [[Category: Spada AP]] | |
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Current revision
Crystal Structure of Human Coagulation Factor XA Complexed with RPR208707
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Categories: Homo sapiens | Large Structures | Becker MR | Choi-Sledeski YM | Ewing WR | Guilloteau JP | Klein SI | Maignan S | Mikol V | Pauls HW | Pouzieux S | Spada AP

