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1jif

From Proteopedia

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{{Seed}}
 
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[[Image:1jif.png|left|200px]]
 
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<!--
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==Crystal structure of bleomycin-binding protein from bleomycin-producing Streptomyces verticillus complexed with copper(II)-bleomycin==
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The line below this paragraph, containing "STRUCTURE_1jif", creates the "Structure Box" on the page.
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<StructureSection load='1jif' size='340' side='right'caption='[[1jif]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1jif]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_verticillus Streptomyces verticillus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JIF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JIF FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLM:BLEOMYCIN+A2'>BLM</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
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{{STRUCTURE_1jif| PDB=1jif | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jif FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jif OCA], [https://pdbe.org/1jif PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jif RCSB], [https://www.ebi.ac.uk/pdbsum/1jif PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jif ProSAT]</span></td></tr>
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</table>
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===Crystal structure of bleomycin-binding protein from bleomycin-producing Streptomyces verticillus complexed with copper(II)-bleomycin===
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== Function ==
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[https://www.uniprot.org/uniprot/Q53793_9ACTN Q53793_9ACTN]
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_11706014}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 11706014 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ji/1jif_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_11706014}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1JIF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_verticillus Streptomyces verticillus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JIF OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jif ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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The 1.6-A crystal structure of the copper(II)-bound bleomycin complexed with the bleomycin-binding protein from bleomycin-producing Streptomyces verticillus., Sugiyama M, Kumagai T, Hayashida M, Maruyama M, Matoba Y, J Biol Chem. 2002 Jan 18;277(3):2311-20. Epub 2001 Nov 12. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11706014 11706014]
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</StructureSection>
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[[Category: Single protein]]
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[[Category: Large Structures]]
[[Category: Streptomyces verticillus]]
[[Category: Streptomyces verticillus]]
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[[Category: Hayashida, M.]]
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[[Category: Hayashida M]]
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[[Category: Kumagai, T.]]
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[[Category: Kumagai T]]
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[[Category: Maruyama, M.]]
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[[Category: Maruyama M]]
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[[Category: Matoba, Y.]]
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[[Category: Matoba Y]]
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[[Category: Sugiyama, M.]]
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[[Category: Sugiyama M]]
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[[Category: Protein-ligand complex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 20:17:43 2008''
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Current revision

Crystal structure of bleomycin-binding protein from bleomycin-producing Streptomyces verticillus complexed with copper(II)-bleomycin

PDB ID 1jif

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