1tp9

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{{Seed}}
 
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[[Image:1tp9.png|left|200px]]
 
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==PRX D (type II) from Populus tremula==
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The line below this paragraph, containing "STRUCTURE_1tp9", creates the "Structure Box" on the page.
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<StructureSection load='1tp9' size='340' side='right'caption='[[1tp9]], [[Resolution|resolution]] 1.62&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1tp9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Populus_trichocarpa Populus trichocarpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TP9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TP9 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.62&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_1tp9| PDB=1tp9 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tp9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tp9 OCA], [https://pdbe.org/1tp9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tp9 RCSB], [https://www.ebi.ac.uk/pdbsum/1tp9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tp9 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PRX2_POPTR PRX2_POPTR] Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Can reduce H(2)O(2) and short chain organic, fatty acid, and phospholipid hydroperoxides. Plays a role in cell protection against oxidative stress by detoxifying peroxides.<ref>PMID:15032877</ref> <ref>PMID:18230180</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tp/1tp9_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tp9 ConSurf].
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<div style="clear:both"></div>
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===PRX D (type II) from Populus tremula===
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==See Also==
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*[[Peroxiredoxin 3D structures|Peroxiredoxin 3D structures]]
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== References ==
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<references/>
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The line below this paragraph, {{ABSTRACT_PUBMED_15697201}}, adds the Publication Abstract to the page
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__TOC__
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(as it appears on PubMed at http://www.pubmed.gov), where 15697201 is the PubMed ID number.
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</StructureSection>
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[[Category: Large Structures]]
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{{ABSTRACT_PUBMED_15697201}}
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==About this Structure==
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1TP9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Populus_trichocarpa Populus trichocarpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TP9 OCA].
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==Reference==
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Crystal structure and solution NMR dynamics of a D (type II) peroxiredoxin glutaredoxin and thioredoxin dependent: a new insight into the peroxiredoxin oligomerism., Echalier A, Trivelli X, Corbier C, Rouhier N, Walker O, Tsan P, Jacquot JP, Aubry A, Krimm I, Lancelin JM, Biochemistry. 2005 Feb 15;44(6):1755-67. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15697201 15697201]
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[[Category: Populus trichocarpa]]
[[Category: Populus trichocarpa]]
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[[Category: Single protein]]
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[[Category: Corbier C]]
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[[Category: Corbier, C.]]
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[[Category: Echalier A]]
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[[Category: Echalier, A.]]
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[[Category: Jacquot JP]]
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[[Category: Jacquot, J P.]]
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[[Category: Krimm I]]
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[[Category: Krimm, I.]]
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[[Category: Lancelin JM]]
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[[Category: Lancelin, J M.]]
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[[Category: Rouhier N]]
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[[Category: Rouhier, N.]]
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[[Category: Trivelli X]]
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[[Category: Trivelli, X.]]
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[[Category: Tsan P]]
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[[Category: Tsan, P.]]
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[[Category: Walker O]]
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[[Category: Walker, O.]]
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[[Category: Oligomer]]
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[[Category: Peroxiredoxin]]
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[[Category: Thioredoxin fold]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 13:02:31 2008''
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Current revision

PRX D (type II) from Populus tremula

PDB ID 1tp9

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OCA

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