1wt1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:34, 13 March 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1wt1.png|left|200px]]
 
-
<!--
+
==Mutant ABO(H) blood group glycosyltransferase with bound UDP and acceptor==
-
The line below this paragraph, containing "STRUCTURE_1wt1", creates the "Structure Box" on the page.
+
<StructureSection load='1wt1' size='340' side='right'caption='[[1wt1]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1wt1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WT1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WT1 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BHG:2-HEXYLOXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-3,4,5-TRIOL'>BHG</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
-
{{STRUCTURE_1wt1| PDB=1wt1 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wt1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wt1 OCA], [https://pdbe.org/1wt1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wt1 RCSB], [https://www.ebi.ac.uk/pdbsum/1wt1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wt1 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Mutant ABO(H) blood group glycosyltransferase with bound UDP and acceptor===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/BGAT_HUMAN BGAT_HUMAN] This protein is the basis of the ABO blood group system. The histo-blood group ABO involves three carbohydrate antigens: A, B, and H. A, B, and AB individuals express a glycosyltransferase activity that converts the H antigen to the A antigen (by addition of UDP-GalNAc) or to the B antigen (by addition of UDP-Gal), whereas O individuals lack such activity.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_15475562}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 15475562 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wt/1wt1_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_15475562}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[1wt1]] is a 1 chain structure of [[Galactosyltransferase]] and [[Glycosyltransferase]] with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WT1 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wt1 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Galactosyltransferase|Galactosyltransferase]]
+
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
-
*[[Glycosyltransferase|Glycosyltransferase]]
+
__TOC__
-
 
+
</StructureSection>
-
==Reference==
+
-
<ref group="xtra">PMID:015475562</ref><references group="xtra"/>
+
-
[[Category: Glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase]]
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Barry, C H.]]
+
[[Category: Large Structures]]
-
[[Category: Blancher, A.]]
+
[[Category: Barry CH]]
-
[[Category: Borisova, S N.]]
+
[[Category: Blancher A]]
-
[[Category: Evans, S V.]]
+
[[Category: Borisova SN]]
-
[[Category: Lee, H J.]]
+
[[Category: Evans SV]]
-
[[Category: Palcic, M M.]]
+
[[Category: Lee HJ]]
-
[[Category: Seto, N O.L.]]
+
[[Category: Palcic MM]]
-
[[Category: Zheng, R B.]]
+
[[Category: Seto NOL]]
-
[[Category: Transferase]]
+
[[Category: Zheng RB]]

Current revision

Mutant ABO(H) blood group glycosyltransferase with bound UDP and acceptor

PDB ID 1wt1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools