This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1wuq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:34, 13 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1wuq.png|left|200px]]
 
-
<!--
+
==Structure of GTP cyclohydrolase I Complexed with 8-oxo-GTP==
-
The line below this paragraph, containing "STRUCTURE_1wuq", creates the "Structure Box" on the page.
+
<StructureSection load='1wuq' size='340' side='right'caption='[[1wuq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1wuq]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WUQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WUQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8GT:8-OXO-GUANOSINE-5-TRIPHOSPHATE'>8GT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1wuq| PDB=1wuq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wuq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wuq OCA], [https://pdbe.org/1wuq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wuq RCSB], [https://www.ebi.ac.uk/pdbsum/1wuq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wuq ProSAT], [https://www.topsan.org/Proteins/RSGI/1wuq TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5SH52_THET8 Q5SH52_THET8]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wu/1wuq_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wuq ConSurf].
 +
<div style="clear:both"></div>
-
===Structure of GTP cyclohydrolase I Complexed with 8-oxo-GTP===
+
==See Also==
-
 
+
*[[Cyclohydrolase 3D structures|Cyclohydrolase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16169877}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16169877 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_16169877}}
+
-
 
+
-
==About this Structure==
+
-
1WUQ is a 5 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WUQ OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:16169877</ref><references group="xtra"/>
+
-
[[Category: GTP cyclohydrolase I]]
+
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: Kuramitsu S]]
-
[[Category: Masui, R.]]
+
[[Category: Masui R]]
-
[[Category: Nakagawa, N.]]
+
[[Category: Nakagawa N]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Tanaka Y]]
-
[[Category: Tanaka, Y.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S.]]
+
-
[[Category: Beta barrel]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Protein-inhibitor complex]]
+
-
[[Category: Pteridine]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Tetrahydrobiopterin]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:00:17 2009''
+

Current revision

Structure of GTP cyclohydrolase I Complexed with 8-oxo-GTP

PDB ID 1wuq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools