This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1wyb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:35, 13 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1wyb.gif|left|200px]]
 
-
{{Structure
+
==Structure of 6-aminohexanoate-dimer hydrolase==
-
|PDB= 1wyb |SIZE=350|CAPTION= <scene name='initialview01'>1wyb</scene>, resolution 1.80&Aring;
+
<StructureSection load='1wyb' size='340' side='right'caption='[[1wyb]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1wyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Flavobacterium_sp. Flavobacterium sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WYB FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/6-aminohexanoate-dimer_hydrolase 6-aminohexanoate-dimer hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.46 3.5.1.46]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wyb OCA], [https://pdbe.org/1wyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wyb RCSB], [https://www.ebi.ac.uk/pdbsum/1wyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wyb ProSAT]</span></td></tr>
-
}}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NYLB2_FLASK NYLB2_FLASK] Involved in nylon oligomer degradation.<ref>PMID:6389532</ref> <ref>PMID:6646204</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wy/1wyb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wyb ConSurf].
 +
<div style="clear:both"></div>
-
'''Structure of 6-aminohexanoate-dimer hydrolase'''
+
==See Also==
-
 
+
*[[6-aminohexanoate-dimer hydrolase 3D structures|6-aminohexanoate-dimer hydrolase 3D structures]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
1WYB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Flavobacterium_sp. Flavobacterium sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WYB OCA].
+
__TOC__
-
[[Category: 6-aminohexanoate-dimer hydrolase]]
+
</StructureSection>
-
[[Category: Flavobacterium sp.]]
+
[[Category: Flavobacterium sp]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Higuchi, Y.]]
+
[[Category: Higuchi Y]]
-
[[Category: Kawamoto, I.]]
+
[[Category: Kawamoto I]]
-
[[Category: Matsumoto, K.]]
+
[[Category: Matsumoto K]]
-
[[Category: Mizuno, N.]]
+
[[Category: Mizuno N]]
-
[[Category: Negoro, S.]]
+
[[Category: Negoro S]]
-
[[Category: Ohki, T.]]
+
[[Category: Ohki T]]
-
[[Category: Shibata, N.]]
+
[[Category: Shibata N]]
-
[[Category: Takeo, M.]]
+
[[Category: Takeo M]]
-
[[Category: Tsurukame, J.]]
+
[[Category: Tsurukame J]]
-
[[Category: Wakitani, Y.]]
+
[[Category: Wakitani Y]]
-
[[Category: hydrolase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:03:03 2008''
+

Current revision

Structure of 6-aminohexanoate-dimer hydrolase

PDB ID 1wyb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1wyb"
Personal tools