This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1x0m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1x0m" [edit=sysop:move=sysop])
Current revision (13:35, 13 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1x0m.png|left|200px]]
 
-
{{STRUCTURE_1x0m| PDB=1x0m | SCENE= }}
+
==a Human Kynurenine Aminotransferase II Homologue from Pyrococcus horikoshii OT3==
-
 
+
<StructureSection load='1x0m' size='340' side='right'caption='[[1x0m]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
===a Human Kynurenine Aminotransferase II Homologue from Pyrococcus horikoshii OT3===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1x0m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X0M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X0M FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x0m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x0m OCA], [https://pdbe.org/1x0m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x0m RCSB], [https://www.ebi.ac.uk/pdbsum/1x0m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x0m ProSAT]</span></td></tr>
-
[[1x0m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X0M OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/O57946_PYRHO O57946_PYRHO]
-
<ref group="xtra">PMID:016138312</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Kynurenine--oxoglutarate transaminase]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Pyrococcus horikoshii]]
+
Check<jmol>
-
[[Category: Chon, H.]]
+
<jmolCheckbox>
-
[[Category: Kanaya, S.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x0/1x0m_consurf.spt"</scriptWhenChecked>
-
[[Category: Koga, Y.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Matsumura, H.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Takano, K.]]
+
</jmolCheckbox>
-
[[Category: Aminotransferase]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x0m ConSurf].
-
[[Category: Transferase]]
+
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Pyrococcus horikoshii OT3]]
 +
[[Category: Chon H]]
 +
[[Category: Kanaya S]]
 +
[[Category: Koga Y]]
 +
[[Category: Matsumura H]]
 +
[[Category: Takano K]]

Current revision

a Human Kynurenine Aminotransferase II Homologue from Pyrococcus horikoshii OT3

PDB ID 1x0m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools