This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1z3h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1z3h" size="450" color="white" frame="true" align="right" spinBox="true" caption="1z3h, resolution 3.100&Aring;" /> '''The exportin Cse1 i...)
Current revision (13:38, 13 March 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1z3h.gif|left|200px]]<br /><applet load="1z3h" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1z3h, resolution 3.100&Aring;" />
 
-
'''The exportin Cse1 in its cargo-free, cytoplasmic state'''<br />
 
-
==Overview==
+
==The exportin Cse1 in its cargo-free, cytoplasmic state==
-
Cse1 mediates nuclear export of importin alpha, the nuclear localization, signal (NLS) import adaptor. We report the 3.1 A resolution structure of, cargo-free Cse1, representing this HEAT repeat protein in its cytosolic, state. Cse1 is compact, consisting of N- and C-terminal arches that, interact to form a ring. Comparison with the structure of cargo-bound Cse1, shows a major conformational change leading to opening of the structure, upon cargo binding. The largest structural changes occur within a hinge, region centered at HEAT repeat 8. This repeat contains a conserved, insertion that connects the RanGTP and importin alpha contact sites and, that is essential for binding. In the cargo-free state, the RanGTP binding, sites are occluded and the importin alpha sites are distorted. Mutations, that destabilize the N- to C-terminal interaction uncouple importin alpha, and Ran binding, suggesting that the closed conformation prevents, association with importin alpha.
+
<StructureSection load='1z3h' size='340' side='right'caption='[[1z3h]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[1z3h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z3H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z3H FirstGlance]. <br>
-
1Z3H is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae] with MG as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1Z3H OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
==Reference==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z3h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z3h OCA], [https://pdbe.org/1z3h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z3h RCSB], [https://www.ebi.ac.uk/pdbsum/1z3h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z3h ProSAT]</span></td></tr>
-
The structure of the nuclear export receptor Cse1 in its cytosolic state reveals a closed conformation incompatible with cargo binding., Cook A, Fernandez E, Lindner D, Ebert J, Schlenstedt G, Conti E, Mol Cell. 2005 Apr 29;18(3):355-67. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15866177 15866177]
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CSE1_YEAST CSE1_YEAST] Export receptor for importin alpha (SRP1). Mediates importin-alpha re-export from the nucleus to the cytoplasm after import substrates have been released into the nucleoplasm.<ref>PMID:9744791</ref> <ref>PMID:9857050</ref> <ref>PMID:9774694</ref> <ref>PMID:10394916</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z3/1z3h_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z3h ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Single protein]]
+
[[Category: Conti E]]
-
[[Category: Conti, E.]]
+
[[Category: Cook A]]
-
[[Category: Cook, A.]]
+
[[Category: Ebert J]]
-
[[Category: Ebert, J.]]
+
[[Category: Fernandez E]]
-
[[Category: Fernandez, E.]]
+
[[Category: Lindner D]]
-
[[Category: Lindner, D.]]
+
[[Category: Schlenstedt G]]
-
[[Category: Schlenstedt, G.]]
+
-
[[Category: MG]]
+
-
[[Category: cse1]]
+
-
[[Category: exportin]]
+
-
[[Category: heat repeat]]
+
-
[[Category: nuclear transport]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 07:13:17 2007''
+

Current revision

The exportin Cse1 in its cargo-free, cytoplasmic state

PDB ID 1z3h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools