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2dph

From Proteopedia

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[[Image:2dph.gif|left|200px]]
 
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{{Structure
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==Crystal Structure of Formaldehyde dismutase==
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|PDB= 2dph |SIZE=350|CAPTION= <scene name='initialview01'>2dph</scene>, resolution 2.27&Aring;
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<StructureSection load='2dph' size='340' side='right'caption='[[2dph]], [[Resolution|resolution]] 2.27&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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<table><tr><td colspan='2'>[[2dph]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DPH FirstGlance]. <br>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Formaldehyde_dismutase Formaldehyde dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.99.4 1.2.99.4] </span>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.27&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dph FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dph OCA], [https://pdbe.org/2dph PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dph RCSB], [https://www.ebi.ac.uk/pdbsum/2dph PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dph ProSAT]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dph FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dph OCA], [http://www.ebi.ac.uk/pdbsum/2dph PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2dph RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/FDM_PSEPU FDM_PSEPU] Active against a range of primary alcohols as well as some secondary alcohols. Exhibits higher activity against alcohols with longer carbon chains.<ref>PMID:3514215</ref>
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== Evolutionary Conservation ==
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'''Crystal Structure of Formaldehyde dismutase'''
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dp/2dph_consurf.spt"</scriptWhenChecked>
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2DPH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPH OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Formaldehyde dismutase]]
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dph ConSurf].
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<div style="clear:both"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Pseudomonas putida]]
[[Category: Pseudomonas putida]]
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[[Category: Single protein]]
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[[Category: Hasegawa T]]
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[[Category: Hasegawa, T.]]
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[[Category: Yamano A]]
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[[Category: Yamano, A.]]
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[[Category: Yanase H]]
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[[Category: Yanase, H.]]
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[[Category: dismutation of aldehyde]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:37:38 2008''
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Current revision

Crystal Structure of Formaldehyde dismutase

PDB ID 2dph

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