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2drw

From Proteopedia

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{{Seed}}
 
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[[Image:2drw.png|left|200px]]
 
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<!--
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==The crystal structutre of D-amino acid amidase from Ochrobactrum anthropi SV3==
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The line below this paragraph, containing "STRUCTURE_2drw", creates the "Structure Box" on the page.
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<StructureSection load='2drw' size='340' side='right'caption='[[2drw]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2drw]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Brucella_anthropi Brucella anthropi]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2d83 2d83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DRW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DRW FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene></td></tr>
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{{STRUCTURE_2drw| PDB=2drw | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2drw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2drw OCA], [https://pdbe.org/2drw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2drw RCSB], [https://www.ebi.ac.uk/pdbsum/2drw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2drw ProSAT]</span></td></tr>
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</table>
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===The crystal structutre of D-amino acid amidase from Ochrobactrum anthropi SV3===
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== Function ==
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[https://www.uniprot.org/uniprot/Q9LCC8_BRUAN Q9LCC8_BRUAN]
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_17331533}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 17331533 is the PubMed ID number.
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<jmolCheckbox>
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-->
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/2drw_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_17331533}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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2DRW is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Ochrobactrum_anthropi Ochrobactrum anthropi]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2d83 2d83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DRW OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2drw ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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<ref group="xtra">PMID:17331533</ref><references group="xtra"/>
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</StructureSection>
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[[Category: Ochrobactrum anthropi]]
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[[Category: Brucella anthropi]]
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[[Category: Asano, Y.]]
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[[Category: Large Structures]]
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[[Category: Komeda, H.]]
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[[Category: Asano Y]]
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[[Category: Okazaki, S.]]
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[[Category: Komeda H]]
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[[Category: Suzuki, A.]]
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[[Category: Okazaki S]]
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[[Category: Yamane, T.]]
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[[Category: Suzuki A]]
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[[Category: Amidase]]
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[[Category: Yamane T]]
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[[Category: D-stereospecific]]
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[[Category: Hydrophobic]]
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[[Category: Penicillin recognizing protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 00:50:30 2009''
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Current revision

The crystal structutre of D-amino acid amidase from Ochrobactrum anthropi SV3

PDB ID 2drw

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